Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0127 ATGAGTCTGGTGGGCTTATTGGGATCTGCAGAACTAGCAAGTGCTCAGTATTATCAGAAAATCGGAGAGAAACTTGTCCCTTACTGGAAGATCAACGTCAACCCGGCCGGTACCGGCAACTTCACCACCATCCAAGAAGCCATAAACTCAGTCCCTTCCAACAACAACAACTGGCTTTCCATCAATGTAAAGCCAGGCATCTACAGGGAAAAAGTGAGGATTCCTGATGATAAGCCTTATATAGTATTGAAAGGAGCAGGGAAGGGGAGAACTATTGTTGTTTGGGATGATCATGAAACAGTTGCACAGAGTCCTACGTTTACGTTGCTGGCTGATAATGTGGTCGTCAAATGTATGAGCTTTCGGAATTCATACAATAATCCGATTAACGGCAACCAGAGGAAACCCGCGGTGGCGGCAATGGTGGCCAGCGACAAGGCTTTCTTCTTCCGAGTAGGGTTCTTTGGTTTACAAGACACATTGTGGGATGATCAAGGACGGCATTACTATAAACTTTGTACCATTCAAGGCGCTGTTGATTTTATTTTTGGTGCTGGCCAATCCATATTTGAGAGATGTTCAATATCAGTGATAGCAGGAGCCCTAGATGGGCTACCTGGGTTTATAACAGCGCAAGGAAGAACAAATCCAAATGATGCAAATGGATTTGTGTTTAAAGACTGCCACGTATTTGGGAATGGGACAACATACTTGGGAAGGCCTTGGAGAAGCTATTCAAGAGTTCTCTTCTACAAAACCAATATGTCTCATGTTGTTGAACCAAAGGGTTGGCAAACTTGGAATTTTGCTACTGATGTGAATAGGGTAACATTTGCAGAATATGGTTGTTTTGGGCCCGGGTCAAATACATCAGAACGAGTGAGCTGGTCCAAGAAGAATCTTGATTTATTATACGTGGAGCAAATGGCTAATATGAGCTTCATTGATTCTGAAGGATGGCTTCAGAATCAACTTTTCTGA 981 0.4332 MSLVGLLGSAELASAQYYQKIGEKLVPYWKINVNPAGTGNFTTIQEAINSVPSNNNNWLSINVKPGIYREKVRIPDDKPYIVLKGAGKGRTIVVWDDHETVAQSPTFTLLADNVVVKCMSFRNSYNNPINGNQRKPAVAAMVASDKAFFFRVGFFGLQDTLWDDQGRHYYKLCTIQGAVDFIFGAGQSIFERCSISVIAGALDGLPGFITAQGRTNPNDANGFVFKDCHVFGNGTTYLGRPWRSYSRVLFYKTNMSHVVEPKGWQTWNFATDVNRVTFAEYGCFGPGSNTSERVSWSKKNLDLLYVEQMANMSFIDSEGWLQNQLF 326
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0127 326 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 322 - -
Lele17g0127 326 SUPERFAMILY Pectin lyase-like 30 322 IPR011050 -
Lele17g0127 326 FunFam Pectinesterase 27 325 - -
Lele17g0127 326 Pfam Pectinesterase 31 315 IPR000070 GO:0030599|GO:0042545
Lele17g0127 326 ProSitePatterns Pectinesterase signature 2. 175 184 IPR033131 -
Lele17g0127 326 Gene3D - 29 326 IPR012334 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele17g0127 Lele-ChrLele17 13108694 13112961 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0127 31 268 Carbohydrate Esterase AT2G19150 47.083 8.40e-76 233