Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele17g0114 | ATGGGAAAAAGAGTTCGTGATAAGAAACATGATGTGGCAGAGGAGAATAATACTAGTGGTGCTAGCACCAGTGCTAGTGCAAGTTCCAGTACTAGTCACCATGGAAGAAGTTGGAGCATTCTTAATATTATGAAGTATCATCATTGGCCTCATAATGTCAAGAAAAAGCTCACTCACAAGAAGAATGCTGCTGGAAAAAATCCTGAAGGTGGAGCTGATAATATGCAGGAGGACTCTGAGCCAAACTCAAAATTATCTACTGTTGAAGAAATGTTGGCACAGTCCAATTCACAAGCAAAACATTCTGTGAAAGCCAGACTAAAAGCACTTCTTACTGATGAGATAGCCAGAAAGAAGGGTCAGCATAAAAGAAGTTCAACCTACCCTGTAAAGCCAAAACCACCAAAACAAACCATTTCTATTCCCAATTTAGATCATTCAGATCCTAATCTCGTCTCCGAAAATAATCCTAATAAAATGGTTCCACACTACACTACTGAGACATTCGAGGCTTTGCCACCAGCATGCTCAACACCGGCCGATCAAGAGATCTGTGTAGAGTGTGGGACCGTGTTTTCTAGTGATTCAATGGAGCATAATAATAGTATGGTTCATAAGCATCAGAAACCACCATTGGAATATCACAAAGCATTGATGAAGGAAACATTGAGCTATGAAGAGAAATCAATGCGTGCCAAGTTACTCACAACTGATGTGTCACCTTGTCTCTTTAAGGATTTCTTGGATGCTCTTGATATGATAAATTCAAATAAGGATTTGCTGTTAAAATTTTTGCAGCATCAACATTCTCCGTTGGCATGCCACTTTCCTAACCAACAGGAATCAACAACAAGAAAGATGATACTAAATAAGTCCAGTTCATTTCCTGTTCCTTGCTCGTCTTCGTCATCTAAAGTTAAAGGACAAGATACAAACAAAATGGCAGATGATGAGATGCTCATATCAAGAGAGGCACAAAATGATAGTCAAACGCAAAAGTCGATAATATCTCGGTCTAAATCTTTGGGAAAAAGTGACCAGCAGCAACCTGTTTCATTGGACTCTTCTTATTATACATCGGTACCGTCCAAGGTTCGAAATCCGAGGGCGATTAAGCGTTTCAAGGATCTTAGACAGAAGGTGAAACATGTTATCGAAGAGAGCAGAAACGAGAAACGCCGCATAGCCATGGATGCTGTGTATGACAAAGTTCCTCATGGAAATGATAAACCTCCCATTGACTTGAAGAGGAAGATTCCCAAAGTTCCCATAGACACTACTATTTCACCAAGTGAATTTGGCGGTTTTAGAAAGCGTCGAATGTCTCCGATAAGAACTTCATCTTTGAATGAATCAGTTTGGAAATATTCTCAGCTTTATGAGACTTGTTTTAACAAAAAATCTAGGTACCCTAAATCTGAAAGGTTAAAGTTGGAAACAACAGAGGAGAAAAATTCAGTATTAAGGACCCCAAAATCCTTTCAAAGGTTTCTTTCCCTACCAAATCTTAAAGATTACTTTTCTCAAAATGAGGAGGCTTCTTCTATTTTACCTCCACAGGTTCCATTCAGGAAATTTGCAGAGAGAACATCTAGTCCAAGCACTAGTGTAGGTAACATTACAACTCCAGAAAGTGTTTTAAAAAGTGCTCATAAAGGAATAGACATCAGAAGTGATTCAGAGTTGGTATCAGATGATGAAGAAGACAAGGAGTCAAATCAAAATGAAAGTATAGGAATTGATGATTATTTTGGAAGATTAACAGACAGTGAAATGAATGAATCAACTTCTGTGGTTGCTGAAACAAAATCAATCTCATTTTCTGGCTCCAGCTTCCTAGATGATTCAATTAGCTCTGATGACAAGATATCTCTACCAGAAGATTCAAAAATAACGCCATGGCCATTAGATGGATTAGATCATCTGACAGAGCAAGTACAAGAACTTGACATTGCAGATTATCATGAACTGGTGTTGAGTAGTGAAGATGATTTCCAGAAATTTGGAACTCTGAACAAGAACCTGAACTTGGTAATTCCTGGCCTCGAAGTGGACAATAACAATGCAGCTGAATTTAACTATGTGAAAGATGTTTTAGAACTATCTGGTTTATCCACAAGTCATGAATCTCTCAGCACATGGTTTTCCAATGAGCGACCAGTTGATCCAACAGTGTATGATGAATTAGAAGGTTGCTTACTCTTTGATACTCAAAGTTCCGGTAATGAAGAATCTGGTGGGGCCCATTGTAACCATTTGCTTTTGTTTGATTTGATTAATGAGGTTTTGATTGAGATTTTTGGGAGATCATATAGTTATTATCCAAAACCTTTGACTTCTCTCTGTCATGTTTACCCGATACCAGTAGGAGACCAAGTTCTGAGAGAAGTGTGGACTCTTATTAAGTGGTGTCTGAACTTGAATTCAGAGTTATATCCTTCCTTGGATTATTATGTTAGCAGAGACTTGGCAAGAAGTGATGGGTGGATGAATCTTCAGTTTGATTCTGAATGTGTGGGGCTTGGGCTTGATGACTTGATTTTTGATGATCTTTTGGATGAGATTGTGTGTTATTGA | 2577 | 0.3842 | MGKRVRDKKHDVAEENNTSGASTSASASSSTSHHGRSWSILNIMKYHHWPHNVKKKLTHKKNAAGKNPEGGADNMQEDSEPNSKLSTVEEMLAQSNSQAKHSVKARLKALLTDEIARKKGQHKRSSTYPVKPKPPKQTISIPNLDHSDPNLVSENNPNKMVPHYTTETFEALPPACSTPADQEICVECGTVFSSDSMEHNNSMVHKHQKPPLEYHKALMKETLSYEEKSMRAKLLTTDVSPCLFKDFLDALDMINSNKDLLLKFLQHQHSPLACHFPNQQESTTRKMILNKSSSFPVPCSSSSSKVKGQDTNKMADDEMLISREAQNDSQTQKSIISRSKSLGKSDQQQPVSLDSSYYTSVPSKVRNPRAIKRFKDLRQKVKHVIEESRNEKRRIAMDAVYDKVPHGNDKPPIDLKRKIPKVPIDTTISPSEFGGFRKRRMSPIRTSSLNESVWKYSQLYETCFNKKSRYPKSERLKLETTEEKNSVLRTPKSFQRFLSLPNLKDYFSQNEEASSILPPQVPFRKFAERTSSPSTSVGNITTPESVLKSAHKGIDIRSDSELVSDDEEDKESNQNESIGIDDYFGRLTDSEMNESTSVVAETKSISFSGSSFLDDSISSDDKISLPEDSKITPWPLDGLDHLTEQVQELDIADYHELVLSSEDDFQKFGTLNKNLNLVIPGLEVDNNNAAEFNYVKDVLELSGLSTSHESLSTWFSNERPVDPTVYDELEGCLLFDTQSSGNEESGGAHCNHLLLFDLINEVLIEIFGRSYSYYPKPLTSLCHVYPIPVGDQVLREVWTLIKWCLNLNSELYPSLDYYVSRDLARSDGWMNLQFDSECVGLGLDDLIFDDLLDEIVCY | 858 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele17g0114 | 858 | MobiDBLite | consensus disorder prediction | 57 | 86 | - | - | |
| Lele17g0114 | 858 | MobiDBLite | consensus disorder prediction | 118 | 150 | - | - | |
| Lele17g0114 | 858 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
| Lele17g0114 | 858 | MobiDBLite | consensus disorder prediction | 324 | 359 | - | - | |
| Lele17g0114 | 858 | MobiDBLite | consensus disorder prediction | 16 | 35 | - | - | |
| Lele17g0114 | 858 | Pfam | Protein of unknown function (DUF3741) | 227 | 269 | IPR022212 | - | |
| Lele17g0114 | 858 | MobiDBLite | consensus disorder prediction | 557 | 580 | - | - | |
| Lele17g0114 | 858 | MobiDBLite | consensus disorder prediction | 323 | 359 | - | - | |
| Lele17g0114 | 858 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Lele17g0114 | 858 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 183 | 210 | IPR013087 | - | |
| Lele17g0114 | 858 | Pfam | Domain of unknown function (DUF4378) | 691 | 854 | IPR025486 | - | |
| Lele17g0114 | 858 | Coils | Coil | 371 | 391 | - | - | |
| Lele17g0114 | 858 | PANTHER | PROTEIN TRM32 | 22 | 857 | IPR044257 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele17g0114 | Lele-ChrLele17 | 12801365 | 12806674 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele17g0114 | 25 | 848 | TRM (TON1 Recruiting Motif) Superfamily | AT5G02390 | 30.454 | 2.26e-86 | 291 |