Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0112 ATGCAATTTCTGTCCTTCACTTTTAGTTTTCTTATCATTTTCAGCAGTGTAATTTGCAATGCAAATGATTGTTCTAATCCTCCGAAAGTCATTAATGTTGGTAAGATTGGGCGAGGAAGGTTGAGAACAATTCAAAGGGCTATTAACTCCATCCCAATCCACAACACTCGATGGATTCATATCCGAATTGAAGCAGGAAATTATATGGAAAAAGCAATGATACCAATAAACAAACCATGCATTTTTCTTGAAGGAGCTGGAAGTTCTTCTACAGTTATTCAGTGGAAGGATCATTCAAAAACAACTCAAAGTTATACTTTTGAGTCAAATGCACCTAACGTTATAGTCAAGGGCATTAAATTCGTGAACTTGTATAATCATCCCCCGGGGGAAGATGAAGGTGAGAGAATTGTGCCAGCAGTAGCAGCAGCAGTGAGAGGAGACAAAAGTGCATTCTATGATTGTGTCTTCAAAGGTGTTCAAGACACTTTAATGGATGATGCAGGTCGCCATTATTACCATAATTGCTACATTCAAGGTCAAACTGATTTCATTTTTGGAAAAGGCCAATCAATCTATGAGAATTGCACAATCTATTTTAAACTAGGGCCAGATGGTAGGAATGGTGCAATAGCAGCACAAAAGAGAGAATCCGTTGATGAAACAAGTGGGTATGTGTTCAATGGATGCCACGTGGATGGAAATGGAAAAACCATCCTTGGAAGACCTTATGGGCCCTATTCTAGGGTCATTTTCGCCAATTCATATCTCTCTCGTGTGGTTGACCCTGCGGGTTGGAATGCTTGGAATCAACATGACGTGTAA 825 0.3964 MQFLSFTFSFLIIFSSVICNANDCSNPPKVINVGKIGRGRLRTIQRAINSIPIHNTRWIHIRIEAGNYMEKAMIPINKPCIFLEGAGSSSTVIQWKDHSKTTQSYTFESNAPNVIVKGIKFVNLYNHPPGEDEGERIVPAVAAAVRGDKSAFYDCVFKGVQDTLMDDAGRHYYHNCYIQGQTDFIFGKGQSIYENCTIYFKLGPDGRNGAIAAQKRESVDETSGYVFNGCHVDGNGKTILGRPYGPYSRVIFANSYLSRVVDPAGWNAWNQHDV 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0112 274 Gene3D - 25 274 IPR012334 -
Lele17g0112 274 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 24 271 - -
Lele17g0112 274 SUPERFAMILY Pectin lyase-like 27 271 IPR011050 -
Lele17g0112 274 Pfam Pectinesterase 32 271 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0112 Lele-ChrLele17 12759561 12764316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0112 41 270 Carbohydrate Esterase AT2G19150 46.352 2.00e-65 204