Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0049 ATGCAGGGGGTTAGGCCAAGTGTAGGGCGTGAACTGGGAAGCCTTCCGTGGGCACATGCTTCTCTTCCTTGTGACTTTGTTTGCCTTGAAAATACAACTTCTAAAGACAAATTATATTTGAGGAAGAGGACAAGGATGCGTCGGTGGCTTTGTTGTACTCGTCACGTGGAAGACTCATACCCACCACATGAAAGTGAGCACCTGAAAAGCCCTTACAGAGATGATGACCAAAGAGACTCAAGAGTGTCAGCTCCCGTCAAACATGAACCACCAAAGTCTGCACCACCACCTATTGAAGTACCAGCATTATCTTTAGAGGAGCTAAAGGAAAAGACTGACAACTTTGGGTCAAAGGCTTTGATTGGTGAAGGATCTTATGGAAGAGTGTATTATACAACCTTAAATAATGGAAAAGCTGTTGCAGTGAAAAAGCTTGATGTTTCGTCTGAAGAGGAATCAAATGTTGAGTTTTTGACCCAGGTTTCCATGGTCTCAAGATTGAAGCATGAGAATTTCATTGAGTTGCATGGTTACTGTGTTGAGGGAAATATGCGTGTACTGGCATATGAGTTTGCAACTATGGGCTCACTTCATGACATATTGCATGGCAGAAAGGGTGTTCAAGGGGCACAACCTGGGCCAACTCTTGATTGGATGCAGCGAGTTAGAATTGCAGTAGATGCAGCAAAAGGATTGGAATATTTGCATGAGAAAGTTCAACGATCGATTATACATAGAGATGTCAGATCAAGCAATGTGCTTATTTTTGAAGATTACAAAGCAAAGATAGCTGATTTTAACCTTTCCAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCTACTCGAGTTTTGGGAACATTTGGTTATCATGCCCCAGAGTATGCGATGACTGGCCAGTTGACACAAAAAAGTGATGTCTACAGTTTTGGTGTTGTTCTTCTTGAGCTTCTTACAGGAAGAAAACCTGTTGATCATACCATGCCTCGTGGACAGCAAAGTCTTGTTACATGGGCTACTCCAAGACTGAGTGAAGATAAAGTTAAACAATGTGTGGACCCAAAATTGAAGGGAGAATATCCCCCCAAAGGGGTAGCTAAGCTTGCCGCGGTTGCAGCGCTGTGTGTGCAATACGAATCTGAGTTCAGGCCAAATATGAGCATTGTTTTTAAAGCCCTTCAACCGCTTCTGAAGACTCCTGCTCCTGCCCCAGAATCTTGA 1221 0.4373 MQGVRPSVGRELGSLPWAHASLPCDFVCLENTTSKDKLYLRKRTRMRRWLCCTRHVEDSYPPHESEHLKSPYRDDDQRDSRVSAPVKHEPPKSAPPPIEVPALSLEELKEKTDNFGSKALIGEGSYGRVYYTTLNNGKAVAVKKLDVSSEEESNVEFLTQVSMVSRLKHENFIELHGYCVEGNMRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVRIAVDAAKGLEYLHEKVQRSIIHRDVRSSNVLIFEDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYESEFRPNMSIVFKALQPLLKTPAPAPES 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0049 406 Gene3D Transferase(Phosphotransferase) domain 1 193 401 - -
Lele17g0049 406 Gene3D Phosphorylase Kinase; domain 1 90 191 - -
Lele17g0049 406 MobiDBLite consensus disorder prediction 59 86 - -
Lele17g0049 406 ProSitePatterns Tyrosine protein kinases specific active-site signature. 243 255 IPR008266 GO:0004672|GO:0006468
Lele17g0049 406 ProSitePatterns Protein kinases ATP-binding region signature. 121 144 IPR017441 GO:0005524
Lele17g0049 406 MobiDBLite consensus disorder prediction 59 99 - -
Lele17g0049 406 ProSiteProfiles Protein kinase domain profile. 115 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0049 406 Pfam Protein tyrosine and serine/threonine kinase 120 391 IPR001245 GO:0004672|GO:0006468
Lele17g0049 406 FunFam PTI1-like tyrosine-protein kinase 3 77 191 - -
Lele17g0049 406 SUPERFAMILY Protein kinase-like (PK-like) 92 393 IPR011009 -
Lele17g0049 406 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 49 401 - -
Lele17g0049 406 SMART tyrkin_6 115 393 IPR020635 GO:0004713|GO:0006468
Lele17g0049 406 FunFam PTI1-like tyrosine-protein kinase 3 193 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0049 Lele-ChrLele17 9884206 9898789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0049 93 394 Receptor kinase-like Gene Family AT4G02010 48.525 5.79e-89 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lele17g0049 PK_Tyr_Ser-Thr 3.9e-47 CL0016