Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0038 ATGTCTATCGGTTGCCCAAAATACATCCCACACTTCTTGGCACATTTTGTCATTGCCGCCTACAATCTTGCCAATGTCTCCCCATCGGATTTTCAAACTTTGCTTGCTCTTCATGGTTCTCCTGATGATACTACAATTGCTATAGCTCAGTTCCTACACTCCCTTATTACCTCCCTCTCTCCATTTGCTCCAACTAGTAATCAGAATGGATTTTCCTTGGAACTCACTGCTGCCCTGTTGGCCAAGGATAAATTCAATGCATTTGGCTTGATGCAACCCTTCTCTGCATATAATAACCAGAGATCTGTCAGAGCTTATGGTATATACCCTTATGCCTCCTTCTTTAACCATGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGATACTAGTGCAACGGATGACAACCATAACACTGGCATTATCATTAGGATGATCCATGGTGTTCCTCAAGCAAATTGGTCAGATAATGATAGTGTTGAGGATGATGTTGAGGATGTTGAAGAGGCGATGGAAGAGGATGAATGTGTAAATATGCGGCTTCTGACACTGAAAGGTAATACTCAGTCCAATGTTATGGAATGTAATGTCTGTGGCAACTTGGAGAGCTACAATGTCCTTGATGGTGATGGAGGACAAGATGGAGTTTTCATGGATGACTGA 666 0.4249 MSIGCPKYIPHFLAHFVIAAYNLANVSPSDFQTLLALHGSPDDTTIAIAQFLHSLITSLSPFAPTSNQNGFSLELTAALLAKDKFNAFGLMQPFSAYNNQRSVRAYGIYPYASFFNHDCLPNACRFDYVDTSATDDNHNTGIIIRMIHGVPQANWSDNDSVEDDVEDVEEAMEEDECVNMRLLTLKGNTQSNVMECNVCGNLESYNVLDGDGGQDGVFMDD 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0038 221 Pfam SET domain 96 146 IPR001214 GO:0005515
Lele17g0038 221 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 13 153 IPR044238 -
Lele17g0038 221 Coils Coil 158 178 - -
Lele17g0038 221 Gene3D SET domain 88 150 IPR046341 -
Lele17g0038 221 SUPERFAMILY SET domain 47 150 IPR046341 -
Lele17g0038 221 Gene3D - 12 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0038 Lele-ChrLele17 7845490 7846449 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele17g0038 SET 5.8e-05 No_clan