Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0003 ATGTTGTGGGAACTCAAAAGCAAACTCTCGTGGCCTTGCTTTCCAAGCTTAAGCAGGTGTATTTCACTAGCATACCATAGGCGTTGTTCTTGCCCAATTTTCCTGTTTCGATATCCACCTCTCATCACAGTCACTGGTCGAGAATTCTGTTCACTTAGCTTTAAACGAGGGGGAGATGCTCTGGATTTGACAGTGATTCAACTGGAATTAGCTCGAAGTCGTATCCAGTACCTCCTGGAACTGTTTCTTGTTCCCTTGTGTTGGTTACTGTTGTGGATGAGTTTGCTCTATGTAGTTGGATTTGGCCTAAAGTTGGGGCATCTTCTTTTGGCGCTGTGTTGCTGGATTGTTTCAGTCATATACATGTACTGGTTCAACAACGGTGGAATTATGGAAACCAAGGTTAGTTTTCTTGGTGGTGGCGCCGGTAAGATGCGGTTCAAGTGGTGGGAGAAGATCTCTGGCAATAGTTGTAAGATTCATCAACACTACTACCAGTGTATTGGGTCCAAGAAAGTTCGGAGAACTCTGTGGAGAAAACTTTTGCTGACATGGGTACTGGGCTGGACCATGGTATCTTTGTGGATCTTTTGCTTCATGACCTTTCAAGCTACTGAGAAGAGGAAAGAGACTCTGGCAAGTATGTGTGATGAAAGGGCAAGGATGCTTCAGGATCAGTTTAATGTTAGTATGAACCATATCCAAGCCATGTCAATTCTCATCTCAACCTTCCACCATGCCAAGTCCCCTTCTGCAATCGATCAGGAAGATCGTGAAAATGTCTTGCGGGCTAGAGAGTTAGGGAAAGGAGTTTTAACCGCTCCTTTTAGGTTGCTCAAAACAAATAATCTAGGAGTTATCCTCACTTTCGCAGTCTACAACACAGATCTTCCATCAAATGCAACCCCGAATGAAAGGATTCAAGCGACAAATGGGTATCTTGGTGGCGTCTTTGATGTCGAGTCATTGGTTGAAAAATTACTTCAACAACTTGCTAGCAAGCAAACTGTGATTGTTAATGTGTATGATACTACTAATCATACCCACCCTATTCCCATGTATGGTTCAAACGTATCAGATGATGGATACTATCATGTTAGCTCCCTGAACTTCGGAGATCCTTTCAGGAAGCATGAGATGCACTGCAGGTTCAAGCAGAAACCTCCATGGCCATGGTTGGCAATTGCTACATCAATCGGAATCCTTGTTATTGCGCTACTTGTAGGGCATATTTTTCATGCTACCGTGAATCGAATTGCTAAAGTGGAGGATGATTACCGTGGGATGATGGAACTTAAACAACGAGCCGAGGCAGCTGATGTTGCAAAATCCCAGTTTCTGGCCACTGTTTCTCATGAGATCAGAACACCAATGAATGGTGTCCTTGGAATGTTGCATATACTTATGGACACAGATCTAGATGTAACACAGAAAGAATATGTCAGAACAGCACAGGGTAGTGGAAAAGCTCTAGTGTCACTTATAAATGAGGTTTTGGACCAGGCAAAGATTGAATCTGGTAAGCTTGAGCTTGAGGCAGTGCTATTTGACATGCGAGCAATTTTGGATGATGTGTTGTCACTATTCTCTGAGAAATCTCAAGAAAAAGGAGTAGAGTTGGCAGTGTATATCTCAGATAAGGTTCCTGAACAGCTAGTGGGTGATCCAGGAAGGTTTCGGCAAATAATTACAAATCTCATGGGCAATTCAATCAAGTTCACGGATAAAGGGCACATATTTGTCACTGTCCATCTTATTGAAGAAGTTGTCAATTCAATTGAAGTTGCAACATCGAAGGATACCTTGAGTGGCTTTCCTGTTGCCGATAGATGTCAAAGTTGGAAAGGATTCAGTTCTGTCAGTCAAGAGGGACCTCTGGGATCTTTCTCATCTTCCTCCTCTGATCGCATTACTCTTATTGTATCTGTTGAAGATACAGGCGAAGGAATTCCTGTAGAAGCCCAATCCCGAATCTTCACTCCATTCATGCAGGTTGGTCCGTCTGTCTCCAGGAAACATGGGGGAACAGGTATTGGGCTAAGCATTAGCAAGTGCTTGGTTGGCCTCATGCATGGGGAAATTGGATTTGTGAGTAGACCAAAGATTGGATCTACTTTCACATTTACAGCTGTCTTCACCAATGAATCCCCTAGTTCAACTGAGGGTAAAACTCAGCAAATTAGCAACCAACCTAACCTTGCATTCTCAGAATTTCAGGGCATGAATGCACTTGTTATACACCCTAGACCTGTCAGAGCTAAAGTGTTGAGATATCACATTAAACGGCTTGGCATTCATGTTGAAATAGCTTCAGATTTAAATCAAGGTTTGTCTACCATAAGCAATGGGGATATAGTTATTAATATGATCCTAGTTGAACATGAAGTCTGGGATAGAGATTCCGGTGTTTCATCTCAGTTCATCAATAACATGAGGAAAATTGATTGCGAGGTTCCTCCAAAGCTGTTTGTTCTTGTTAATTCTAGTAGCTCTTCCAGAACAAGTTCCGTAACATTGGGTGTTCATAATCCAACTTTCATTGTAAAACCTCCGAGAGCAAGCATGCTTGCTGCTACACTACAGCGAGCCATGGGTGTTGGGAACAAGGGGAATCCTCGAAATGGGGAGCTTCCAAGTTTGTCTCTTCGCCATCTTTTGCGTGGGAGAAAAATCCTTATTGTAGATGACAATAGTGTGAACCGAATAGTAGCAGCTGGAGCTTTAGAAAAGTATGGAGCTGATGTGGTCTGTGTTAACAGTGGAAAAGATGCCATCGCTATGCTGAAGCCGCCTCATAAATTTGATGCCTGTTTTATGGATATTCAAATGCCAGAAATGGATGGGTTTGAAGCTACTCGGAGGATTCGGGAGATAGAGCACCATGTCAACATAGGAGAAGTGCCTGTGGAAACCTTGGAGAATACTTCAAACTGGCATTTACCCATTTTGGCTATGACTGCAGACGTGATTCAGGCAACACATGAGGAATGCCTGAAGTGTGGAATGGATGGATATGTTTCGAAACCATTTGAAGCCGAACAGCTTTATCGGGAAGTTTCACTGTTTTTCCAATCAACTTCGTGA 3084 0.4293 MLWELKSKLSWPCFPSLSRCISLAYHRRCSCPIFLFRYPPLITVTGREFCSLSFKRGGDALDLTVIQLELARSRIQYLLELFLVPLCWLLLWMSLLYVVGFGLKLGHLLLALCCWIVSVIYMYWFNNGGIMETKVSFLGGGAGKMRFKWWEKISGNSCKIHQHYYQCIGSKKVRRTLWRKLLLTWVLGWTMVSLWIFCFMTFQATEKRKETLASMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKSPSAIDQEDRENVLRARELGKGVLTAPFRLLKTNNLGVILTFAVYNTDLPSNATPNERIQATNGYLGGVFDVESLVEKLLQQLASKQTVIVNVYDTTNHTHPIPMYGSNVSDDGYYHVSSLNFGDPFRKHEMHCRFKQKPPWPWLAIATSIGILVIALLVGHIFHATVNRIAKVEDDYRGMMELKQRAEAADVAKSQFLATVSHEIRTPMNGVLGMLHILMDTDLDVTQKEYVRTAQGSGKALVSLINEVLDQAKIESGKLELEAVLFDMRAILDDVLSLFSEKSQEKGVELAVYISDKVPEQLVGDPGRFRQIITNLMGNSIKFTDKGHIFVTVHLIEEVVNSIEVATSKDTLSGFPVADRCQSWKGFSSVSQEGPLGSFSSSSSDRITLIVSVEDTGEGIPVEAQSRIFTPFMQVGPSVSRKHGGTGIGLSISKCLVGLMHGEIGFVSRPKIGSTFTFTAVFTNESPSSTEGKTQQISNQPNLAFSEFQGMNALVIHPRPVRAKVLRYHIKRLGIHVEIASDLNQGLSTISNGDIVINMILVEHEVWDRDSGVSSQFINNMRKIDCEVPPKLFVLVNSSSSSRTSSVTLGVHNPTFIVKPPRASMLAATLQRAMGVGNKGNPRNGELPSLSLRHLLRGRKILIVDDNSVNRIVAAGALEKYGADVVCVNSGKDAIAMLKPPHKFDACFMDIQMPEMDGFEATRRIREIEHHVNIGEVPVETLENTSNWHLPILAMTADVIQATHEECLKCGMDGYVSKPFEAEQLYREVSLFFQSTS 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0003 1027 ProSiteProfiles Response regulatory domain profile. 742 864 IPR001789 GO:0000160
Lele17g0003 1027 Gene3D - 506 716 IPR036890 -
Lele17g0003 1027 SUPERFAMILY CheY-like 886 1020 IPR011006 -
Lele17g0003 1027 Gene3D - 200 251 - -
Lele17g0003 1027 SMART REC_2 889 1019 IPR001789 GO:0000160
Lele17g0003 1027 Pfam Response regulator receiver domain 891 1018 IPR001789 GO:0000160
Lele17g0003 1027 FunFam Histidine kinase 4 245 388 - -
Lele17g0003 1027 SMART CHASE_2 169 356 IPR006189 -
Lele17g0003 1027 Pfam His Kinase A (phospho-acceptor) domain 442 507 IPR003661 GO:0000155|GO:0007165
Lele17g0003 1027 SMART HisKA_10 442 507 IPR003661 GO:0000155|GO:0007165
Lele17g0003 1027 CDD PRTases_typeI 851 918 IPR000836 -
Lele17g0003 1027 Pfam CHASE domain 255 354 IPR006189 -
Lele17g0003 1027 CDD HisKA 442 503 IPR003661 GO:0000155|GO:0007165
Lele17g0003 1027 PRINTS Bacterial sensor protein C-terminal signature 639 653 IPR004358 GO:0016310|GO:0016772
Lele17g0003 1027 PRINTS Bacterial sensor protein C-terminal signature 674 692 IPR004358 GO:0016310|GO:0016772
Lele17g0003 1027 PRINTS Bacterial sensor protein C-terminal signature 657 667 IPR004358 GO:0016310|GO:0016772
Lele17g0003 1027 PRINTS Bacterial sensor protein C-terminal signature 698 711 IPR004358 GO:0016310|GO:0016772
Lele17g0003 1027 ProSiteProfiles CHASE domain profile. 251 381 IPR006189 -
Lele17g0003 1027 Coils Coil 419 439 - -
Lele17g0003 1027 Gene3D - 410 505 - -
Lele17g0003 1027 ProSiteProfiles Histidine kinase domain profile. 449 714 IPR005467 -
Lele17g0003 1027 FunFam Histidine kinase 4 414 505 - -
Lele17g0003 1027 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 554 712 IPR003594 -
Lele17g0003 1027 ProSiteProfiles Response regulatory domain profile. 890 1023 IPR001789 GO:0000160
Lele17g0003 1027 CDD REC_hyHK_CKI1_RcsC-like 891 1019 - -
Lele17g0003 1027 CDD HATPase_EvgS-ArcB-TorS-like 559 712 - -
Lele17g0003 1027 SUPERFAMILY CheY-like 737 865 IPR011006 -
Lele17g0003 1027 Gene3D CHASE domain 252 388 IPR042240 -
Lele17g0003 1027 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 429 508 IPR036097 GO:0000155|GO:0007165
Lele17g0003 1027 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 496 709 IPR036890 -
Lele17g0003 1027 SMART HKATPase_4 554 714 IPR003594 -
Lele17g0003 1027 PANTHER TWO-COMPONENT HISTIDINE KINASE 184 1016 - -
Lele17g0003 1027 Gene3D - 879 1021 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0003 Lele-ChrLele17 208904 214537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0003 93 255 Miscellaneous Gene Families AT1G27320 55.429 2.23e-45 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele17g0003 HATPase_c 3.4e-29 CL0025