Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0002 ATGTCCGTGAAGTGGTTCTCTTTAGCTTCATTTTCTCTCGCATCATCATCATCATCATCTTCATCTTCATCCATCACACCGTGCTCTTTGATCTTTCTAGTGTTACTTTGGATTTTAGTTGAGAACTATGATAGAATCTTTATGGTCACTGGTCGAGAATTCTGTTCACTTAGCTTTAAACGAGGGGGAGATGCTCTGGATTTGACAGTGGTTCACCTGGAGTTAGCTCGAAGTCGTATCCAGTACCTCCTGGAACTGTTTCTTGTTCCCTTGTGTTGGTTACTGTTGTGGATGAGTTTGCTCTATGTAGTTGGATTTGGCCTAAAGTTGGGGCATCTACTTTTGGCGCTGTGTTGCTGGATTGTTTCAGTCATATACATGTACTGGTTCAACAACGGTGGAATTATGGAAACCAAGGTTAGTTTTCTTGGTGGTGGCGCCGGTAAGATGCGGCTCAAGTGGTGGGAGAAGATCTTTGGCAATAGTTGTAAGATTCATCAACACTACTACCAGTGTATTGGGTCCAAGAAAGTTCGGAGAACTCTGTGGAGAAAACTTTTGCTGACATGGGTACTGGGCTGGACCATGGTATCCTTGTGGATCTTTTGCTTCGTGACCTTTCAAGCTACTGAGAAGAGGAAAGAGACTCTGTCAAGTATGTGTGATGAAAGGGCAAGGATGCTTCAGGATCAGTTTAATGTTAGTATGAACCATATCCAAGCCATGTCCATTCTCATCTCAACCTTCCACCATGCCAAGTCCCCTTCTGCAATCGATCAGAGAACATTTGCTAGGTACACTGAGCGAACTGCTTTTGAGAGGCCCCTTACTAGTGGTGTTGCTTATGCTGTGAGGGTGCTTCATTCTGAAAGGGAACAATTCGAGAAGCAACAAGGTTGGACCATTAAGAGGATGGATATCCTTGAGCAAAACCCTATTCATGAGGATGATTATGCTCCTGAGGCACTGGAGCCTTCCCCAGATCGAGAAGAATATGCTCCTGTCATTTTTGCACAGGAAACAATTTCCCATGTCATTTCTGTTGATGTGCTGTCCGGAAAGGAAGATCGTGAAAATGTCTTGCGGGCTAGAGAGTTAGGGAAAGGAGTTTTAACCGCTCCTTTTAGGCTGCTCAAAACAAATAATCTAGGAGTTATCCTCACTTTCGCGGTCTACAGCACAGATCTTCCATCAAATGCAGCTCCGAATGAAAGGATTCAAGCGTTAAATGGGTATCTTGGTGGCATCTTTGATATCGAGTCATTGGTTGAAAAATTACTTCAACAACTTGCTAGCAAGCAAACTGTGATTGTTAATGTGTATGATACTACTAATCATACCCACCCTATTCCCATGTATGGTTCAAACGTATCAGATGATGGATACTATCATGTTAGCTCCCTGAACTTCGGAGATACTTTCAGGAAGCATGAGATGCACTGCAGGTTCAAACAGAAACCTCCATGGCCATGGGTGGCAATTGCTACATCAATCGGAATCCTTGTTATTGCGCTACTTGTAGGGCATATTTTTCATGCTACCGTGAATCGAATTGCTAAAGTGGAGGATGATTACCGTGGGATGATGGAACTTAAACAACGAGCCGAGGCAGCTGATGTTGCAAAATCCCAGTTTCTGGCCACTGTTTCTCATGAGATCAGAACACCAATGAATGGTGTCCTTGGAATGTTGCATATGCTTATGGAAACAGATCTAGATGTAACACAGAAAGAATATGTCAGAACAGCACAGGGTAGTGGAAAAGCTCTAGCGTCACTTATAAATGAGGTTTTGGACCAGGCAAAGATTGAATCTGGTAAGCTTGAGCTTGAGGCAGTGCTATTTGACATGCGAGCAATTTTGGATGATGTGTTGTCACTATTCTCTGAGAAATCTCAAGAAAAAGGAGTAGAGTTGGCAGTGTATATCTCAGATAAGGTTCCTGAACAGCTAGTGGGTGATCCAGGAAGGTTTCGGCAAATAATTACAAATCTCATGGGCAATTCAATCAAGTTCACGGATAAAGGGCACATATTTGTCACTGTCCATCTTATTGAAGAAGTTGTCAATTCAGTTGAAGTTGCAACATTGAAGGATACCTTGAGTGGCTTTCCTGTTGCTGATAGATGTCAAAGTTGGAAAGGATTCAGTTCTGTCAGTCAAGAGGGACCTCTGGGATCTTTCTCATCTTCCTCCTCTGATCGCATTACTCTTATTGTATCTGTTGAAGATACAGGCGAAGGAATTCCTGTAGAAGCCCAATCCCGAATCTTCACTCCATTCATGCAGGTTGGTCCGTCTGTCTCCAGGAAACATGGGGGAACAGGTATTGGGCTAAGCATTAGCAAGTGCTTGGTTGGCCTCATGCATGGGGAAATTGGATTTGTGAGTAGACCAAAGATTGGATCTACTTTCACATTTACAGCTGTCTTCAACAATGAATCCCCTAGTTCAACTGAGGGTAAAACTCAGCAAATTAGCAACCAACCTAACCTTGCATTCTCAGAATTTCAGGGCATGAATGCACTTGTTATAGACCCTAGACCTGTCAGAGCTAAAGTGTTGAGATATCACATTAAACGGCTTGGCATTCATGTTGAAATAGCTTCTGATTTAAATCAAGGTTTGTCTACCATAAGCAATGGGGATATAGTTATTAATATGATCCTAGTTGAACATGAAGTCTGGGATAGAGATTCCGGTGTTTCATCTCAGTTCATCAATAACATGAGGAAAATTGATTGCGGGGTTCCTCCAAAGCTGTTTGTTCTTGTTAATTCTAGTAGCTCTTCCAGAACAAGTTCCGTAACATTGGGTGTTCATAATCCTACTTTCATTGTAAAACCTCTGAGAGCAAGCATGCTTGCTGCTACACTACAGCGAGCCATGGGTGTTGGGAACAAGGGGAATCCTCGAAATGGGGAGCTTCCAAGTTTGTCTCTTCTCCATCTTTTGCGTGGGAGAAAAATCCTTATTGTAGATGACAACAGAGTGAACCGAATAGTAGCAGCTGGAGCTTTAAAAATGTATGGAGCTGATGTGGTCTGTGTTAACAGTGGAGAAGATGCCATCGCTATGCTGAAGCCGCCTCATCAATTTGATGCCTGTTTTATGGATATTCAAATGCCAGAAATGGATGGGTTTGAAGCTACTCGGAGGATTCGGGAGATAGAACACCATGTCAACATAGGAGAAGTGCCTGTGGAAACCTTGGAGAATACTTCAAACTGGCATTTACCCATTTTGGCTGTGACTGCAGACGTGATTCAGGCAACACATGAGGAATGCCTGAAGTGTGGAATGGATGGATATGTTTCGAAACCATTTGAAGCCGAACAGCTTTATTGGGAAGTTTCACGGTTTTTCCAATCAACTTCGTGA 3381 0.4295 MSVKWFSLASFSLASSSSSSSSSSITPCSLIFLVLLWILVENYDRIFMVTGREFCSLSFKRGGDALDLTVVHLELARSRIQYLLELFLVPLCWLLLWMSLLYVVGFGLKLGHLLLALCCWIVSVIYMYWFNNGGIMETKVSFLGGGAGKMRLKWWEKIFGNSCKIHQHYYQCIGSKKVRRTLWRKLLLTWVLGWTMVSLWIFCFVTFQATEKRKETLSSMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKSPSAIDQRTFARYTERTAFERPLTSGVAYAVRVLHSEREQFEKQQGWTIKRMDILEQNPIHEDDYAPEALEPSPDREEYAPVIFAQETISHVISVDVLSGKEDRENVLRARELGKGVLTAPFRLLKTNNLGVILTFAVYSTDLPSNAAPNERIQALNGYLGGIFDIESLVEKLLQQLASKQTVIVNVYDTTNHTHPIPMYGSNVSDDGYYHVSSLNFGDTFRKHEMHCRFKQKPPWPWVAIATSIGILVIALLVGHIFHATVNRIAKVEDDYRGMMELKQRAEAADVAKSQFLATVSHEIRTPMNGVLGMLHMLMETDLDVTQKEYVRTAQGSGKALASLINEVLDQAKIESGKLELEAVLFDMRAILDDVLSLFSEKSQEKGVELAVYISDKVPEQLVGDPGRFRQIITNLMGNSIKFTDKGHIFVTVHLIEEVVNSVEVATLKDTLSGFPVADRCQSWKGFSSVSQEGPLGSFSSSSSDRITLIVSVEDTGEGIPVEAQSRIFTPFMQVGPSVSRKHGGTGIGLSISKCLVGLMHGEIGFVSRPKIGSTFTFTAVFNNESPSSTEGKTQQISNQPNLAFSEFQGMNALVIDPRPVRAKVLRYHIKRLGIHVEIASDLNQGLSTISNGDIVINMILVEHEVWDRDSGVSSQFINNMRKIDCGVPPKLFVLVNSSSSSRTSSVTLGVHNPTFIVKPLRASMLAATLQRAMGVGNKGNPRNGELPSLSLLHLLRGRKILIVDDNRVNRIVAAGALKMYGADVVCVNSGEDAIAMLKPPHQFDACFMDIQMPEMDGFEATRRIREIEHHVNIGEVPVETLENTSNWHLPILAVTADVIQATHEECLKCGMDGYVSKPFEAEQLYWEVSRFFQSTS 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0002 1126 Gene3D - 206 257 - -
Lele17g0002 1126 FunFam Histidine kinase 4 258 487 - -
Lele17g0002 1126 ProSiteProfiles Response regulatory domain profile. 989 1122 IPR001789 GO:0000160
Lele17g0002 1126 Pfam CHASE domain 257 453 IPR006189 -
Lele17g0002 1126 SMART HKATPase_4 653 813 IPR003594 -
Lele17g0002 1126 CDD REC_hyHK_CKI1_RcsC-like 990 1115 - -
Lele17g0002 1126 ProSiteProfiles Response regulatory domain profile. 841 963 IPR001789 GO:0000160
Lele17g0002 1126 PRINTS Bacterial sensor protein C-terminal signature 738 752 IPR004358 GO:0016310|GO:0016772
Lele17g0002 1126 PRINTS Bacterial sensor protein C-terminal signature 773 791 IPR004358 GO:0016310|GO:0016772
Lele17g0002 1126 PRINTS Bacterial sensor protein C-terminal signature 797 810 IPR004358 GO:0016310|GO:0016772
Lele17g0002 1126 PRINTS Bacterial sensor protein C-terminal signature 756 766 IPR004358 GO:0016310|GO:0016772
Lele17g0002 1126 Coils Coil 518 538 - -
Lele17g0002 1126 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 595 808 IPR036890 -
Lele17g0002 1126 CDD HisKA 541 602 IPR003661 GO:0000155|GO:0007165
Lele17g0002 1126 SUPERFAMILY CheY-like 836 964 IPR011006 -
Lele17g0002 1126 Pfam Response regulator receiver domain 990 1115 IPR001789 GO:0000160
Lele17g0002 1126 Gene3D - 833 965 - -
Lele17g0002 1126 ProSiteProfiles CHASE domain profile. 254 480 IPR006189 -
Lele17g0002 1126 SUPERFAMILY CheY-like 985 1122 IPR011006 -
Lele17g0002 1126 FunFam Histidine kinase 4 513 604 - -
Lele17g0002 1126 Gene3D - 605 815 IPR036890 -
Lele17g0002 1126 PANTHER TWO-COMPONENT HISTIDINE KINASE 40 1115 - -
Lele17g0002 1126 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 528 607 IPR036097 GO:0000155|GO:0007165
Lele17g0002 1126 CDD HATPase_EvgS-ArcB-TorS-like 658 811 - -
Lele17g0002 1126 SMART HisKA_10 541 606 IPR003661 GO:0000155|GO:0007165
Lele17g0002 1126 SMART REC_2 988 1118 IPR001789 GO:0000160
Lele17g0002 1126 Gene3D - 509 604 - -
Lele17g0002 1126 SMART CHASE_2 254 455 IPR006189 -
Lele17g0002 1126 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 653 810 IPR003594 -
Lele17g0002 1126 Gene3D - 981 1121 - -
Lele17g0002 1126 Pfam His Kinase A (phospho-acceptor) domain 541 606 IPR003661 GO:0000155|GO:0007165
Lele17g0002 1126 ProSiteProfiles Histidine kinase domain profile. 548 813 IPR005467 -
Lele17g0002 1126 Gene3D CHASE domain 258 487 IPR042240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0002 Lele-ChrLele17 91167 96761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0002 98 1126 Miscellaneous Gene Families AT1G27320 67.080 0.0 1388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele17g0002 CHASE 2.6e-37 CL0165