Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2359 ATGGCTGTACCAGTGATGAGGATTTTTCCATCGCTTCTGTTACTCCTCTGCTTCTCCTCTGTTTTACTATTACTCTGTCATGGGAAATCAGATTCAGATCATGGTGATTCGTCTTCCACATTGAGGTTGCTTTTGGAGGTGAAGTCGTTCATGGAGGACCCAGAAAATGTTTTGGCTGATTGGTCTGAGACCAACACGGATTACTGTAGTTGGAGAGGAATTACTTGTGGATTGAACTCCATGTTAGTAGTGGGAGTTAACCTTTCTGACTCGTCACTCACTGGGTCAATCTCTCCCTCACTCGGTCTCTTAGAGAACCTGCTCCAACTTGATCTTTCTTCTAACCAACTTACTGGTCCCATCCCACCGGCTCTCTCGAATCTCTCTTCTTTGGAGTATCTGCTTCTCTTCTCCAACCAACTCACTGGTCATATCCCCACTGAGCTAGGCTCACTCGCGAGTCTCCGAGTCATGCGAATCGGCGACAACCCGTTGACAGGTCCCATTCCTTCGTCTTTTGGGAATTTAGTTAGTCTCGTGACTCTTGGTTTGGCCTCTAGTAGTCTCACTGGGTCTATTCCATCGCAGCTCGGACGACTCAATCAGCTCGAGAATCTTGTTCTGCAAGAGAATGAACTCACAGGTCCGATTCCTCCCGAGTTGGGGAAGTGCTCGAACCTCACTGTTTTCACTGCTGCAAACAACGGACTCAATGAGACTCTTCCGAGTGAACTTGGTGGTCTTGAGAATCTTCACCTTCTCAACCTCGCGAATAACAGTATAACAGGGGAGATTCCGAGTCAACTCGGGAATCTGAGTCACCTCGCTTATTTGAATCTCATGGGCAACCAACTCGAAGGTCGTATTCCATCGTCTTTAGCTCAACTGGGTAATCTTCAAAATCTGGATTTGTCGTACAACAAGCTTCTTGGTGGGATTCCTGAAGAACTTGGAAACATGGGTGAGCTAGAATACATGGTTCTGTCTGGGAATCATCTCTCAGGGATCATCCCAAGAGGCATATGTTCCAACATGACGAGTTTGGAGCATTTGATGTTGTCGGATACTGCACTGTCTGGTGAGATTCCAAGTGAGTTAAGCCAGTGTCAATCCATGAAACAACTTGATCTGTCAAACAATTCCTTAAATGGATCTATACCCATTGAACTTTATGAAATGATCGAGTTAACAGATTTGTTACTCAATAACAACAGCTTGGTTGGTTCAATCTCTCCTTTCATAGGAAATCTCAGTAAAATGAACACGCTTGCATTTTTCCACAACAATTTACAAGGTTCTCTCCCAAGAGAGATTGGGAAGCTTGGAAATTTGGAGATTCTGTTTCTATATGATAATCAGTTATCTGGTGAGATTCCTATGGAGATTGGTAATTGTTCAAGCTTGCAGATGATTGATTTCTTCGGGAACAAGTTTTCTGGGGAAATTCCCATCACTATTGGAAGGCTTAAACATTTGAATTTCCTTCATCTCAGACAAAACGAGCTTGTGGGAGAGATTCCAGCTACTTTGGGTAACTGTAATAAACTAACTATTCTGGATTTAGCAGACAATTATCTCTCAGGGGGGGTTCCTTCAACGTTTGCATTACTGAAAGATTTGGAGCAATTCATGCTTTATAACAATTCACTTGAAGGGAATCTCCCTCACCAACTGATAAATCTGAAGAATCTGACAAGGGTGAATCTTTCAAAGAACAGATTGAATGGTAGTTTATCTTCATTATGTAGCTCTCGGAATATTCTGTCTTTTGATGTCACTAACAATGAATTTGATGGTGAGATTCCACCCCAGCTGGGAAATTCACTTTTTCTTGAGAGGCTAAGATTAGGAAAGAACAAGCTTTCTGGGGAAATCCCAAGGACATTGGGGAAAATTGAAGAGCTTTCATTGTTAGACCTGTCTGAAAATTCTCTCACCGGACCGATACAGGCAGAGATTTCCTTGTGCAAGAAGCTAGCTCATGTAGATTTGAACAATAATATGCTTTCTGGGCCAATTCCATCCTGGCTTGGAAGCTTGACTCAGTTGGGAGAGCTTAAGCTATCTTTGAATCAGTTTTCTGGGAATCTTCCATCAGAGCTATTCACATGTTCTAAACTGCTAGTTCTTTCTCTAAACAACAACTCTCTTAATGGAACTATTCCTGATGATATAGGGAATCTCACATCCCTTAATATCCTCAATTTTGAGCAGAACAACTTCTCCGGACCGGTCCCTCCGGCGATAGGTAAGTTGAGCAAGCTTTATGAGCTGAGAATGTCCAGGAACAGCTTTAATGGTGAGATTCCAAGTGAGCTTGGAAGGCTGAAGAATCTGCAAAGCATGTTAGACCTCAGTTACAACAATCTCTCCGGGAAAATCCCGCCTTCGCTCGGGACGCTGGCAAAGTTGGAAGAACTTGATCTTTCTCACAATCAACTCACAGGACAAGTCCCTCTTCAAGTAGGTGAAATGAGCAGCTTGGGAAAGCTTGATCTTTCTTACAATAACCTCGAAGGTGAGTTAAATGAGCAATTTTCACACTGGCCACCTAAGGCTTTTGAAGGTAATTCAAATCTTTGTGGAAGCCCTCTTAAACACTGTGATACCGATGATGCTCGTTCGAGCAATCGTCTGTTAGCCCTGAGTAAAACATCAGTAGTGATAATCTCAGCTCTTTCAACATTAGGAGCAGTGGCACTAGCAATTATTGCAGTAAGAATGTTTGTGAAGAACAAGCAAGAATTTCTCAGAAAAGGAAGCCAAGTGAACTATGTTTTCTCATCCTTCTCGTCCTCTTCATCATCACGAGCGCAACGAAGACCACTTTTCCGGTATAACACAGCAGCGAAGCGAGACATAAGCAACAAGAAGAAAGGAGAAGGATGGAATCTGCTGATATATGAGATGATGGAGAATGGGAGTGTTTGGGATTGGTTACATGGGAAACCAGAAACAACCAGAAGAAGGCTTGATTGGGAAGCAAGAACAGAAGAGTGTGCATACTCACTGAAGGCAACAGAGAAGAGTGATGTGTACAGCATGGGGATAGTGTTGATGGAGCTGGTGAGTGGGAAGATGCCAACAGATGAATCATTTGGAGCTGACTTGGATTTGGTCAGATGGGTTGACATCAACATTCATATACGTTCTCAGGAACTCATTGATCCTCAGCTCAAGCCTCTGTTGCCGGCGCAAGAGTTTGCAGCATTCCAAGTGCTTGAGGTTGCCTTGCACTGCACCAAAACGACGCCGAATCAGAGACCGTCTTCGCGCCAAGTCTGTGATCTTCTCCTTCATGTCTTCAGCAACAGAGTGCTTGACTTTGACAAGATCAACTTGAAGATAATGGATTCAGGACAGGGTTCTTCAAACACTTCAACCTCAAAAGGAACTAATACTGTTGGAAATGGTATTGGCTATGGTCGACCTAAACCTAAACCACCCAAAGAGCAGCAGGGCAAGTCAAAACACAACTCCAATGAGTTGCACTGTTAA 3498 0.4345 MAVPVMRIFPSLLLLLCFSSVLLLLCHGKSDSDHGDSSSTLRLLLEVKSFMEDPENVLADWSETNTDYCSWRGITCGLNSMLVVGVNLSDSSLTGSISPSLGLLENLLQLDLSSNQLTGPIPPALSNLSSLEYLLLFSNQLTGHIPTELGSLASLRVMRIGDNPLTGPIPSSFGNLVSLVTLGLASSSLTGSIPSQLGRLNQLENLVLQENELTGPIPPELGKCSNLTVFTAANNGLNETLPSELGGLENLHLLNLANNSITGEIPSQLGNLSHLAYLNLMGNQLEGRIPSSLAQLGNLQNLDLSYNKLLGGIPEELGNMGELEYMVLSGNHLSGIIPRGICSNMTSLEHLMLSDTALSGEIPSELSQCQSMKQLDLSNNSLNGSIPIELYEMIELTDLLLNNNSLVGSISPFIGNLSKMNTLAFFHNNLQGSLPREIGKLGNLEILFLYDNQLSGEIPMEIGNCSSLQMIDFFGNKFSGEIPITIGRLKHLNFLHLRQNELVGEIPATLGNCNKLTILDLADNYLSGGVPSTFALLKDLEQFMLYNNSLEGNLPHQLINLKNLTRVNLSKNRLNGSLSSLCSSRNILSFDVTNNEFDGEIPPQLGNSLFLERLRLGKNKLSGEIPRTLGKIEELSLLDLSENSLTGPIQAEISLCKKLAHVDLNNNMLSGPIPSWLGSLTQLGELKLSLNQFSGNLPSELFTCSKLLVLSLNNNSLNGTIPDDIGNLTSLNILNFEQNNFSGPVPPAIGKLSKLYELRMSRNSFNGEIPSELGRLKNLQSMLDLSYNNLSGKIPPSLGTLAKLEELDLSHNQLTGQVPLQVGEMSSLGKLDLSYNNLEGELNEQFSHWPPKAFEGNSNLCGSPLKHCDTDDARSSNRLLALSKTSVVIISALSTLGAVALAIIAVRMFVKNKQEFLRKGSQVNYVFSSFSSSSSSRAQRRPLFRYNTAAKRDISNKKKGEGWNLLIYEMMENGSVWDWLHGKPETTRRRLDWEARTEECAYSLKATEKSDVYSMGIVLMELVSGKMPTDESFGADLDLVRWVDINIHIRSQELIDPQLKPLLPAQEFAAFQVLEVALHCTKTTPNQRPSSRQVCDLLLHVFSNRVLDFDKINLKIMDSGQGSSNTSTSKGTNTVGNGIGYGRPKPKPPKEQQGKSKHNSNELHC 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2359 1165 FunFam Uncharacterized protein 389 482 - -
Lele16g2359 1165 Gene3D Transferase(Phosphotransferase) domain 1 979 1101 - -
Lele16g2359 1165 SUPERFAMILY L domain-like 342 670 - -
Lele16g2359 1165 SUPERFAMILY RNI-like 86 407 - -
Lele16g2359 1165 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 580 872 - -
Lele16g2359 1165 SMART LRR_typ_2 128 152 IPR003591 -
Lele16g2359 1165 SMART LRR_typ_2 441 465 IPR003591 -
Lele16g2359 1165 SMART LRR_typ_2 248 272 IPR003591 -
Lele16g2359 1165 SMART LRR_typ_2 825 856 IPR003591 -
Lele16g2359 1165 SMART LRR_typ_2 296 319 IPR003591 -
Lele16g2359 1165 SMART LRR_typ_2 345 369 IPR003591 -
Lele16g2359 1165 SMART LRR_typ_2 104 127 IPR003591 -
Lele16g2359 1165 SMART LRR_typ_2 801 823 IPR003591 -
Lele16g2359 1165 SMART LRR_typ_2 705 728 IPR003591 -
Lele16g2359 1165 SMART LRR_typ_2 200 224 IPR003591 -
Lele16g2359 1165 SMART LRR_typ_2 680 704 IPR003591 -
Lele16g2359 1165 SMART LRR_typ_2 561 584 IPR003591 -
Lele16g2359 1165 SMART LRR_typ_2 489 513 IPR003591 -
Lele16g2359 1165 SMART LRR_typ_2 320 344 IPR003591 -
Lele16g2359 1165 SMART LRR_typ_2 752 776 IPR003591 -
Lele16g2359 1165 Pfam Leucine rich repeat N-terminal domain 43 76 IPR013210 -
Lele16g2359 1165 MobiDBLite consensus disorder prediction 1118 1165 - -
Lele16g2359 1165 SMART LRR_sd22_2 104 130 - -
Lele16g2359 1165 SMART LRR_sd22_2 296 315 - -
Lele16g2359 1165 SMART LRR_sd22_2 801 822 - -
Lele16g2359 1165 SMART LRR_sd22_2 441 456 - -
Lele16g2359 1165 SMART LRR_sd22_2 248 274 - -
Lele16g2359 1165 SMART LRR_sd22_2 537 563 - -
Lele16g2359 1165 Gene3D Ribonuclease Inhibitor 39 182 IPR032675 -
Lele16g2359 1165 Pfam Leucine Rich Repeat 298 319 IPR001611 GO:0005515
Lele16g2359 1165 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 290 388 - -
Lele16g2359 1165 Gene3D Ribonuclease Inhibitor 536 872 IPR032675 -
Lele16g2359 1165 Gene3D Ribonuclease Inhibitor 391 535 IPR032675 -
Lele16g2359 1165 SUPERFAMILY L domain-like 610 866 - -
Lele16g2359 1165 PRINTS Leucine-rich repeat signature 801 814 - -
Lele16g2359 1165 PRINTS Leucine-rich repeat signature 372 385 - -
Lele16g2359 1165 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 37 195 - -
Lele16g2359 1165 Gene3D Ribonuclease Inhibitor 290 390 IPR032675 -
Lele16g2359 1165 MobiDBLite consensus disorder prediction 1118 1136 - -
Lele16g2359 1165 PANTHER UNNAMED PRODUCT 13 534 - -
Lele16g2359 1165 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 196 289 - -
Lele16g2359 1165 MobiDBLite consensus disorder prediction 1148 1165 - -
Lele16g2359 1165 Pfam Protein tyrosine and serine/threonine kinase 987 1096 IPR001245 GO:0004672|GO:0006468
Lele16g2359 1165 SUPERFAMILY Protein kinase-like (PK-like) 962 1103 IPR011009 -
Lele16g2359 1165 Gene3D Ribonuclease Inhibitor 183 289 IPR032675 -
Lele16g2359 1165 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 483 579 - -
Lele16g2359 1165 Pfam Leucine rich repeat 754 814 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2359 Lele-ChrLele16 24006022 24012010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2359 53 895 Receptor kinase-like Gene Family AT5G46330 35.059 5.14e-121 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele16g2359 PK_Tyr_Ser-Thr 1.5e-05 CL0016