Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2358 ATGAGAGAGAGGCAGAAGGTTCGCCTAATATGCAACCATGTAGGGGCTCATAAGAAGTTTCTGTATACCCACTGGCTTTCAAAGCCTTCTTCCTCTGTGCAGGCAAATGCAGCGAATCTTCCTTCCGAACCAAAGGTAGCCCAACCCAAAGAGCTTTATGATATCTTACCTGAAGAAGAAGCAATTTCCACCACAAAAGTCCAGGGTCCTAAACTAACAATCCCCTGCTCTTCAGAAGCAGAGAGCCTTACTCTGTTTTGTCTGGAAATGATTACGTTGCCATATTCTTCATCTCCTTTCTCTCCTTGCTTCTTACGCACCAAATTCAGCACTAATCGCTTCCTCTCTCGAATTCAAAGCAATGATTCTCCAACAAAACCATCCAATTTCGTCCCATTCCTAATCAAGCAAACCCCAGACGACAACAACTTCTTGAAGCGAAGAGAGGCAATAGGGCTTCCCTTTGGATTAGGCCTTTGCGATGTTATGCTTCATTCACTGTCGAAAGCCGCGTCAGCAGCCGAATCAGCAGCAGCTCCATGCCAACTAACAGTGGCCGCTTCAGGCATCGCCTTCTGTGATAAAGTTATGGGAAATGGTCCGCAAGCTGAAAAGGGACAGCTCATTAAGGCACATTATGTTGGGAAATTGGAGAATGGGAAAATTTTCGACAGCAGCTATAATCGTGGCAAGCCTCTTACATTTCGTGTTGGCGTTGGGGAGGTGATCAAAGGATGGGATGAAGGCATATTGGGAGGAGAAGGAATACCACCCATGCTTGCAGGAGGCAAACGAACATTGAAAATTCCTCCAGAACTTGCATATGGCCCAAGAGGCGCTGGTTGTAGAGGAGGTTCATGTATCATCCCTCCTGATTCGGTCCTATTATTTGATGTGGAGTTCATTAGCAAGGCTTGA 918 0.4619 MRERQKVRLICNHVGAHKKFLYTHWLSKPSSSVQANAANLPSEPKVAQPKELYDILPEEEAISTTKVQGPKLTIPCSSEAESLTLFCLEMITLPYSSSPFSPCFLRTKFSTNRFLSRIQSNDSPTKPSNFVPFLIKQTPDDNNFLKRREAIGLPFGLGLCDVMLHSLSKAASAAESAAAPCQLTVAASGIAFCDKVMGNGPQAEKGQLIKAHYVGKLENGKIFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGEGIPPMLAGGKRTLKIPPELAYGPRGAGCRGGSCIIPPDSVLLFDVEFISKA 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2358 305 SUPERFAMILY FKBP-like 184 303 - -
Lele16g2358 305 FunFam Peptidylprolyl isomerase 178 304 - -
Lele16g2358 305 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 206 305 IPR001179 GO:0003755
Lele16g2358 305 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 201 302 IPR001179 GO:0003755
Lele16g2358 305 Gene3D - 178 305 IPR046357 GO:0003755
Lele16g2358 305 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 139 303 IPR044183 GO:0009507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2358 Lele-ChrLele16 23988248 23991041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2358 204 303 Calmodulin-binding Proteins AT5G48570 45.000 1.68e-17 80.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g2358 16 23988248 23991041 Lele16g2358 16 23988248 23991041 ECH
Lele13g0043 13 479739 482626 Lele16g2358 16 23988248 23991041 hybridization
Lele14g0039 14 601170 603374 Lele16g2358 16 23988248 23991041 hybridization