Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2357 ATGGCGTCCCAGGATCCTCCACCATCTTTGGAGATACTAGTTCGGACACCCGATAACTTCTCAATCTGGGGTGGACCTCCCTTCCCCAATGCTCAACCTGGTGTCAAGCTTGACAAAGTCTCTTGTTTGAATGCAAAATTCTGCGATAATGGGTCCAGACTCTTGGTCATGAAATCTAACTCTGTTATTACGGTATATGATTGCGCAAACTTTCAAGAGATTAGATCCTTTGAAATACCTAATGTTGCTGCTGCCATCTTGTCCCCTTGTGGTACTTATTTGCTAACCTTTCAAAAACCCTCGGCTCCCCAAGACAAGAATGTGACTTTATGGAACACTGAGACTGGGAATTCTGTTTATCAACACTCCCAAAAGAACATGACAAAAACCACATGGCCCTCGATTCAATTTAGCTCTGATGAAGCTGTTGCATGCCGGATGGCAACTAACGAGGTTCAGTTTTTTGACACGGGGGATTTCTCTAAAGGAATTATCTATCGGTTGAAAGTTCCAGGAGTTGCTGCAATTGAGCTTTCTAAGACCCCTGGATCTCATGTAGCTCTATTAGTTCCAGAGTCCAAGGGGGTTCCTGCTAGTGTACAGATATTTGCTTGTGATAAAGATTCTCAAAGTCAACCTATTGCCCGGAGAAATTTTTTCCGATGCTCAACTGTCCAGTTTAATTGGAATCATGGATCTTCTGGACTTCTAGTGGTGGTGCAATCAGATGTTGATAAAACCAATCAGAGTTACTATGGAGAATCAAAGTTAATCTACCTGACAACAGACGGGACTCAAGAAACAGTTGTGGCTCTTCGTAAAGAGGGACCTGTTCATGATGCCCAGTGGTCATGTTCTGGCTTGGAATTTTGTGTTTTATATGGTTTTATGCCTGCTTCTGCAACTATATTTAACAAGAAGGGCAGACCCATACTTGAGCTTGGCAGTGGTCCTTTCAATACAATTCGATGGAACCCTAAAGGAAAGTTCTTATTTTTGGCTGGTTTTGGTAACCTACCCGGTGATATGGAATTCTGGGATTACGTAGAGTCAAAAAAGATTCGAAAAACAAAGGCTGAATGGTCTGTGACTAGCGAATGGTCTCCTGATGGATGCTACTTCATGACGGCCACAACGGCTCCAAGGCTTCAAGTTGATAATGGGATCAAGGTTTTCAACTATGATGGGTCATTGTACTTTGAGAAGAAGTTTGACAAGTTGTTTCAGGCTGACTGGAAACCAGTGTCACCAAATAAGTTTGATGACATTACTGAATTAATCAAATCTCTGAGCACAGTAAAAATTGAAGATAGCAAACGACCAGCTCAAGGGCTAACACCAACAGCAACCAAAGCTTCATACTGCCCTCCACATGCTAAGAAGGCGGCCGCGATTCAAGCCGAGTTGTTAGGAATGGACCCCACGGAATCAAGCAACATGAGCAAGAATGCGTTACGAAACAAGAAAAAGAGGGAGCGACAAAAAGAGAAAAAGGCCGCCGAAGCTGCTGGTTCTTCGTGA 1521 0.4333 MASQDPPPSLEILVRTPDNFSIWGGPPFPNAQPGVKLDKVSCLNAKFCDNGSRLLVMKSNSVITVYDCANFQEIRSFEIPNVAAAILSPCGTYLLTFQKPSAPQDKNVTLWNTETGNSVYQHSQKNMTKTTWPSIQFSSDEAVACRMATNEVQFFDTGDFSKGIIYRLKVPGVAAIELSKTPGSHVALLVPESKGVPASVQIFACDKDSQSQPIARRNFFRCSTVQFNWNHGSSGLLVVVQSDVDKTNQSYYGESKLIYLTTDGTQETVVALRKEGPVHDAQWSCSGLEFCVLYGFMPASATIFNKKGRPILELGSGPFNTIRWNPKGKFLFLAGFGNLPGDMEFWDYVESKKIRKTKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKVFNYDGSLYFEKKFDKLFQADWKPVSPNKFDDITELIKSLSTVKIEDSKRPAQGLTPTATKASYCPPHAKKAAAIQAELLGMDPTESSNMSKNALRNKKKRERQKEKKAAEAAGSS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2357 506 SUPERFAMILY WD40 repeat-like 45 396 IPR036322 GO:0005515
Lele16g2357 506 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 10 501 IPR011387 GO:0003743|GO:0006413
Lele16g2357 506 Gene3D - 32 194 IPR015943 GO:0005515
Lele16g2357 506 Gene3D - 197 421 IPR015943 GO:0005515
Lele16g2357 506 Coils Coil 482 502 - -
Lele16g2357 506 FunFam Eukaryotic translation initiation factor 2A 30 185 - -
Lele16g2357 506 MobiDBLite consensus disorder prediction 470 506 - -
Lele16g2357 506 Pfam Eukaryotic translation initiation factor eIF2A 217 410 IPR013979 -
Lele16g2357 506 PIRSF Transl_init_eIF2A 5 506 IPR011387 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2357 Lele-ChrLele16 23980758 23985613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2357 51 431 Eukaryotic Initiation Factors Gene Family AT5G27640 23.614 4.30e-22 98.2