Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2344 ATGGGATTCCTCTCCAGAAAACCTCAATTTTCTGAGAAGCTAACTCTTTGCTTGGATAAGATACTTAGCGATGAGACACGAGCAGTTGCATTAGATTGGAGTAAAAGAATCAAAGTTGTTGAAGAACTTGCTTATACAATGGAAGTGACGGAGAAATGTGACGTGTATAGCTTTGGAGTGTTGGCTTTGGAAATCATTATGGGAAAGCATCCAAAAGATCTCATAATTTCCTGTTTCTCATCAACTTCTGCTACTGCAGCACCGACAATAGTTGCTCATGAATTGGATTTCAAGGAAGTGTTAGACCAAAGGCTACCTTATCCTCAAGGCTCGGTTGCTGAGAAGGTGATGTTGATTGTAAGAATAGTTTTTAATTGCTTGAATCAAAATCCACGTACTCGCCCAACCATGGAGCAAGTATGTAAGGACCTTGCCATATGCCATAGCGTCATAATTGATGGGGTTACTTTCTTGGGCAATACTCCACCGTCGATGGAGGCGTGGGCGAGAAAGACTATTCAGGAACCGCCATTGATCTTGCTGGCGATTACAACTCAATCACAAAAGATTATAGTAGGAGGCCAAGCTAATATGATCACTGGTGATGCCAATACTGTGTTGAAGTCAATTAATGGTCAGGTCTTGGGGTTTAGTGGGGACCCTAATAAGAAGGTCCCAATTGTGACTTTAGATGGGCAATTTGGTGATGTTGATCAAGTGGCGATTGATCAGATCAATGTGAATGGATTGAGGTTGAGATCAACGGTTGCGACGACGAATGAAGCAGTTAAAGGGTTGGTATCCTTTACTGTTGAACAATGA 822 0.4197 MGFLSRKPQFSEKLTLCLDKILSDETRAVALDWSKRIKVVEELAYTMEVTEKCDVYSFGVLALEIIMGKHPKDLIISCFSSTSATAAPTIVAHELDFKEVLDQRLPYPQGSVAEKVMLIVRIVFNCLNQNPRTRPTMEQVCKDLAICHSVIIDGVTFLGNTPPSMEAWARKTIQEPPLILLAITTQSQKIIVGGQANMITGDANTVLKSINGQVLGFSGDPNKKVPIVTLDGQFGDVDQVAIDQINVNGLRLRSTVATTNEAVKGLVSFTVEQ 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2344 273 Gene3D Transferase(Phosphotransferase) domain 1 39 152 - -
Lele16g2344 273 SUPERFAMILY Protein kinase-like (PK-like) 42 158 IPR011009 -
Lele16g2344 273 PANTHER LEUCINE RICH REPEAT KINASE 2 42 145 - -
Lele16g2344 273 Pfam Protein tyrosine and serine/threonine kinase 42 144 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2344 Lele-ChrLele16 23813075 23818182 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2344 42 142 Receptor kinase-like Gene Family AT5G49660 38.318 8.38e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele16g2344 PK_Tyr_Ser-Thr 9.2e-08 CL0016