Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2341 ATGAGGTTTTCAGGTTGGACAACTCAAGGTTTATACGAATCCCCCACCATTACATTTTTTAGGTGGGACTCAAATCATATATGCCTTATAATGAATCCTAACAGAGCTGGCACCTTCACTCTAGATGACTTGCTCGCCAACCATAATGCTCCAAGGGGGCATTCGAGGAAATGCATTTGTCTTTTGTCGATTATTATATTGCGTAACACCCACCTATCTCCTGTTGTGCATGGGCCACTCTGTTGCTTGTGTCTCATATTTGTCCGTTTTGGTTGGCACAAGGCCATTGGCAAACTACATTTGTCAGATAGCGCTCCATTGGGATGGAACATGGTTTTTGCAGCAGCCTTTATGCATGTCTTATGTTTGTTATCTGTTACCTATTTGTCTTGCTCCGAAAACATCAAAGATCAGAGTCATCCTGGCTATATGCAGCCTGCTTTTGTTAGTGGGTGGATGTATGTCAATGAAAATGGGCAAATGTGTGGTCCCTATATTCAGGAGCAACTATACGAAGGATTAACTACTGGCTTCTTGCCAGTTGAGCTTCCTGTGTATCCTGTGATCAATGGAACATTAATGAACGCTGTACCATTGAATTACTTCAAGCAGTTTCCTGACCATGTTTCCACAGGGTTCATATATCTGAGCATGAGTAGCTCAGTCATAACCATGCCTACAGGTTGCTCCACATCATCTGGTAAGGATATGACGTCATATGGACAAGGATCCTTTGAGCATGCTCCTCCTGTAGCTGTCAACCTTGATTCACAGTCAGTTTCCCTGTCACATTTCAACAACACCAGTAAGGAATTTTTGACATCGAGGTCAAAGTTACATGAAGAATGCTGTTGGCTTTATGAGGATGAAAAGGGAATGAAGCATGGACCACATTCCATTTTGGAATTAATTTCCTGGTATGGTGTTGGGGATCCAGTTGATTATCTTGGTGGTGGTAGAGATGGTATGGCGTTGGTGGTTGTTTCTGGTTGCAGCATTTTGGTTGTGATCATTGATTCTCCATTTGATGTAAAGGTTTTGGTGATTCATCATACTGAAAATAGGTGTAGCCCCTTTGTCCTTTTGTCTGCTATAAATGCATGGAAAGCAGGAAAGTTTGAAAACATCTGTAGATCAGATTCCAAAAGTGACAGGGCTTGTAGTGATACCAGAAGCTTCATCTATGAAATATCTGAGGACATTTCTTCTCAGCTGCATTCAGGAGTCATGAAAACTGCCCGCAGGGTGGTGTTAGATGAGATTATTAGTAACACCATTGCAGAATTTGTTACTGAAAAGAAATCTCGTAGGCATAAGCTTGACTCAGTTGATCAGCCTTCTGAGATTAGCTTGTTAGGCTGCAGAATGACTGAGGCTGCTGTGGAGATGAGAAAAGGTACTGTTCTTACAAGTGAGCCAGTATCTTCCCAAATGCTTGATGATCAGTCTTCTTGTGAAGTTTCCAGGGTGTCTCTGACAAGCGCTAAATCGGTTGGAAGCATTGAAAACTTTTGGTGGTCATATGCTGTTGTTCGTAAAGTACTTTGTGATTATTGCATGCAAGTCATGTGGAATGCTGTGGTTTATGATTCTATGGCGGAGTACATACATAACTGGAGAAAGAGAAAACTTTGGTCTATTTGTCCTAAGCCTCAACCATCTATTAATGGATGTCAAGATTATGGTGGAATGATCACATCAGAAGAAGCTTTGCTTCCCAAGCCAGGTTCCTCTGAACATGATGCTCTTCGGCATCCTCATTGTGAAGGGGTGGCAATGGAGAGAGACTATCTTAGTCAATCGTCTTCTATGTCTTCTGTTGTCTTGAAAGATGGAAACATTTCAGAAAATGGAAGAGTGTCATGTTCTGATCGTGATCGTATAGATTTCATATTCATTCTTGAAAGTGTGGAGAATGAGCTTCACTCGTTGTTGGTTGCATCTTTAACTGAACACATTAAAAGTTTAGTTGACAAGGAAGTGAAAAGATTATTTAAGTGTCCTGAAGAAGACAACTTGAGCGAGGATGCTGTCAGCGATGACATTTTTCCAGAGATATCTTGTGACAAAACATCTGAAGAGGGGATTTTATCTTACAATAAGGTTTCTATGAAACAAGGAAAAGAGGGGATTTTATCTTACAATAAGGTTTCTATGAAACAAGGAAATTGTCTTCGAGATTCCATATCTGGAAACCATATGTCTACTTTATTCTCAAGTGCATTTCAGGAGTTGCATGCCAATGTAGGTGATGTGGTTAATGAAAAGGAGATTGGTGACATATCACCTCCTGGATGTGAAAAGAATTCGAAAACTATTGTCCCACACTACAATTATAAGTATCGACCTTTAAGATTAGTCGAAAGTGTTCCTAAGATAACAAAATATGTTACGACAGCCCTATGCCGACAGAAGTTGCATTCTGAGGTTCTTGAAGATTGGAAATCTTTGTTTCTTGAGGCTGCATTCAATCAAGTTTTTGCATCATTCTGCACTACAAAGAAAGTCAGCAAGCCTGATGGTTACATGGAAGGAAAAGTACTGCATTCATCTGAGGAACATTGGAACGATCCAACTCTGGGAAGAATGAAGAAAATACCCAAGAATTCTTCATCAGAAGATTATCGGATAGTTGGGAAATATACATATCATCGCAAGAAGCTGCCACAGATAGAGCTAGGTTCTTCTCAACACATAGCTGTGCCTGTCAAAAAACAAGTGGATAAGCAGAAGGAACGTGTGGATAAGAAGAAGAAACGTGTTTCTGGGGATTTGGATGAGTCTGCCAAAGTTGAAATATCTCCTGATAAAACTACGCAGAGTAAGCTGATAAAAGGGAAGAAGGATAAACATGCTAATGGAAAGTCTTTTGCTGTCAGTGCTAAAAGAAACTTGCAGAGTAAGAAGTCATCTATAAATAATGCGACTATTAAAAAAATATTGAAGCATTCACAGGCAGTCCAAGATGATGTTAAGGATGATGAGAAAAGTAATGGAGAGAAGATTTTAGCCGTTGTAGAAAATAGTGTTGGCAAGAAAAAGTTAGTTGGTAGAAATGGTCGTGATGGTGCCATTCATGGAAAGTCCACTCTTCACTGCTCCAGGGACCCTCTTAACTGTAGGTCTTCTATTAATAGTCATGCCATTGTGTTGTTGGATTCATATATGCTTATCACCTTCCTAGTTGTTGGATTTATATTTATTTTTAACTATGCTTTCTTTTGTGCAACCAATAAAGTATCAAAACCAAAAAGGAAGCATCTAGCGGATGATAGGCCATCCTCACGTCCTTCAAAGGCTTTGAAAATTGCTTATGATGGTTCAAAGGGTGGAGTTGGTGGACACATCACGTCAAAGACAAAGTCTGCTAAATCCAAGCCATTGAATTTATGTCCTAGATCTGATGGATGTGCCAGGACTTCTATCGATGGGTGGAAATGGCATAAATGGTCTGTGAATGCCAGTTCTGCTGATAGAGCATGTGTTAGGGGTACACTGTGTGTTCAAAAGAACTGTATACCATCTGATAGTAACCCAACTCATTGGTCAAATTGTAAGGGTCTTTCTGCACGCACAAATAGAGTGAAAATGCGTAACCTTCTTGCAGCTGCAGAAGGTGCTGATCTTCTGAAAGCCACTCAATTGAAGGCGAGGAAAAAATATTTACGTTTTCAAAGAAGTAAAATACATGACTGGGGTATTGTTGCCTTGGAGTCAATAGAGGCCGAGGACTTCGTGATTGAATATATTGGAGAACTAGTCCGGCCTCGGTATGAAAAGATGGGAATTGGCAGCAGTTACTTGTTTAGACTTGATGATGGTTATGTGGTTGAACAGGAGTTCACGGTTACTGTTGATGCTACGAAAAGAGGTGGGATTGCAAGATTTATAAATCACTCTTGTGAGGTTTACGTTGCATATTTTGGAAGTGCAATGGCTTTGGCCATAGGTATGTATTCCTGTCCTGGACAATTGTGGAAAGATGATGGTTGTCTGAATCTGTTTCCTCTTCCTTTACGGCACCACACTGTTAAGGTCTGA 4041 0.4036 MRFSGWTTQGLYESPTITFFRWDSNHICLIMNPNRAGTFTLDDLLANHNAPRGHSRKCICLLSIIILRNTHLSPVVHGPLCCLCLIFVRFGWHKAIGKLHLSDSAPLGWNMVFAAAFMHVLCLLSVTYLSCSENIKDQSHPGYMQPAFVSGWMYVNENGQMCGPYIQEQLYEGLTTGFLPVELPVYPVINGTLMNAVPLNYFKQFPDHVSTGFIYLSMSSSVITMPTGCSTSSGKDMTSYGQGSFEHAPPVAVNLDSQSVSLSHFNNTSKEFLTSRSKLHEECCWLYEDEKGMKHGPHSILELISWYGVGDPVDYLGGGRDGMALVVVSGCSILVVIIDSPFDVKVLVIHHTENRCSPFVLLSAINAWKAGKFENICRSDSKSDRACSDTRSFIYEISEDISSQLHSGVMKTARRVVLDEIISNTIAEFVTEKKSRRHKLDSVDQPSEISLLGCRMTEAAVEMRKGTVLTSEPVSSQMLDDQSSCEVSRVSLTSAKSVGSIENFWWSYAVVRKVLCDYCMQVMWNAVVYDSMAEYIHNWRKRKLWSICPKPQPSINGCQDYGGMITSEEALLPKPGSSEHDALRHPHCEGVAMERDYLSQSSSMSSVVLKDGNISENGRVSCSDRDRIDFIFILESVENELHSLLVASLTEHIKSLVDKEVKRLFKCPEEDNLSEDAVSDDIFPEISCDKTSEEGILSYNKVSMKQGKEGILSYNKVSMKQGNCLRDSISGNHMSTLFSSAFQELHANVGDVVNEKEIGDISPPGCEKNSKTIVPHYNYKYRPLRLVESVPKITKYVTTALCRQKLHSEVLEDWKSLFLEAAFNQVFASFCTTKKVSKPDGYMEGKVLHSSEEHWNDPTLGRMKKIPKNSSSEDYRIVGKYTYHRKKLPQIELGSSQHIAVPVKKQVDKQKERVDKKKKRVSGDLDESAKVEISPDKTTQSKLIKGKKDKHANGKSFAVSAKRNLQSKKSSINNATIKKILKHSQAVQDDVKDDEKSNGEKILAVVENSVGKKKLVGRNGRDGAIHGKSTLHCSRDPLNCRSSINSHAIVLLDSYMLITFLVVGFIFIFNYAFFCATNKVSKPKRKHLADDRPSSRPSKALKIAYDGSKGGVGGHITSKTKSAKSKPLNLCPRSDGCARTSIDGWKWHKWSVNASSADRACVRGTLCVQKNCIPSDSNPTHWSNCKGLSARTNRVKMRNLLAAAEGADLLKATQLKARKKYLRFQRSKIHDWGIVALESIEAEDFVIEYIGELVRPRYEKMGIGSSYLFRLDDGYVVEQEFTVTVDATKRGGIARFINHSCEVYVAYFGSAMALAIGMYSCPGQLWKDDGCLNLFPLPLRHHTVKV 1346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2341 1346 SUPERFAMILY SET domain 1215 1302 IPR046341 -
Lele16g2341 1346 ProSiteProfiles SET domain profile. 1220 1346 IPR001214 GO:0005515
Lele16g2341 1346 SUPERFAMILY GYF domain 280 308 IPR035445 -
Lele16g2341 1346 SMART set_7 1219 1324 IPR001214 GO:0005515
Lele16g2341 1346 MobiDBLite consensus disorder prediction 904 933 - -
Lele16g2341 1346 MobiDBLite consensus disorder prediction 904 954 - -
Lele16g2341 1346 Gene3D SET domain 1168 1308 IPR046341 -
Lele16g2341 1346 Pfam SET domain 1232 1302 IPR001214 GO:0005515
Lele16g2341 1346 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 1115 1302 IPR044570 GO:0042800|GO:0051568
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2341 Lele-ChrLele16 23726839 23743088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2341 1222 1320 C2H2 Transcription Factor Family AT2G23740 35.897 3.34e-09 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele16g2341 SET 6.4e-05 No_clan