Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2340 ATGGGATTCCTCTCCAGAAAACCTCAATTTTCTAAGAAGCTAGCACTTTGGTGGTTCTCTGGTAGCATTCCAACAACTATTGGCAACTTGTCCACACTCTCAGAACTTTCTTTGAAACACAATCATCTTTCTGGAGCACTTTCACCTGTGATCACATTGCTGACTAGGAATATTAAGTCTCTACACCTAGGTTACAATGATTTCAATGGTCATATCCCTGAAGAGATAGCAAATTTATGCAAGTTGTCTTTCATAGATCTACAAAACAACAGCCTTTCTGGCCACATTCCACCCCAAGTTGGAAGGATGACTAACCTTACACACTTAGCACTTGGAGCTAATCAGTTTACTGGTTCTATCCCCCATGAAATTGGTATGTTGAAGAGACTTCTTGAACTTGACATGTCAACGAACAATCTCTCTGGTAGCATCCCTAGTACTATCGGAAACATGTCCAGTTTACAAGAACTTTATCTTTATTCCAATCAAATCTCAGGGTCGATTCCACAGGAAATAGGGGAACTCTATTCCTTGGAAGTAGTGCAGTTCTTGAATGAGATACTTAGCGACGAGACACAAGCAGTTGCATTAGATTGGAGCAAAAGAATCAAAGTTGTTGAAGAACTTGCTTATACAATGGAAGTGACGAAGAAATGTGATGTTTATAGCTTTGGAGTGTTGGCTTTGGAAATAATTATGGGAAAGCATCCAAGAGATCTCATAATTTCCTATTTCTCATCAACGTCTTCACTTGAAGAACCAACAATAGTTTCTCATGATTTGGATTTGAAGGAACTCTTAGACCAAAGGCTACCTTATCCTCGAGGCTTAGTGGCTGAGAAGGTGATGTTGATTGCAAGAATAGCTTTTACTTGCTTGAATGAAAATCCACGCTCTCGCCCAACCATGGATCAAATATGTAAGGAGCTTACCATGCGAAGATCACATATTTCATAG 957 0.396 MGFLSRKPQFSKKLALWWFSGSIPTTIGNLSTLSELSLKHNHLSGALSPVITLLTRNIKSLHLGYNDFNGHIPEEIANLCKLSFIDLQNNSLSGHIPPQVGRMTNLTHLALGANQFTGSIPHEIGMLKRLLELDMSTNNLSGSIPSTIGNMSSLQELYLYSNQISGSIPQEIGELYSLEVVQFLNEILSDETQAVALDWSKRIKVVEELAYTMEVTKKCDVYSFGVLALEIIMGKHPRDLIISYFSSTSSLEEPTIVSHDLDLKELLDQRLPYPRGLVAEKVMLIARIAFTCLNENPRSRPTMDQICKELTMRRSHIS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2340 318 Pfam Protein tyrosine and serine/threonine kinase 208 310 IPR001245 GO:0004672|GO:0006468
Lele16g2340 318 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 19 187 - -
Lele16g2340 318 Pfam Leucine rich repeat 104 164 IPR001611 GO:0005515
Lele16g2340 318 SUPERFAMILY L domain-like 19 186 - -
Lele16g2340 318 Gene3D Ribonuclease Inhibitor 11 202 IPR032675 -
Lele16g2340 318 Gene3D Transferase(Phosphotransferase) domain 1 204 317 - -
Lele16g2340 318 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 10 96 - -
Lele16g2340 318 FunFam Piriformospora indica-insensitive protein 2 97 194 - -
Lele16g2340 318 SUPERFAMILY Protein kinase-like (PK-like) 208 313 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2340 Lele-ChrLele16 23697816 23701106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2340 205 311 Receptor kinase-like Gene Family AT1G08590 30.556 1.00e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele16g2340 PK_Tyr_Ser-Thr 8.9e-07 CL0016