Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2336 ATGCTTCATTCACTTACGAAAGCCGCGTCAGCAGCCGAATCAGCTGCAGCTCCATGCGAACTAACAGTGGCCGCTTCAGGCATCGCCTTCTGTCATAAAGTTCTGGGAAATGGTCCGCAAGCTGAAAAGGGACAGCTCATTAAGGCACATTATGTTGGGAAATTGGAGAATGGGAAAATTTTCGACAGCAGCTATAATCGTGGCAAGCCTCTTACATTTCGTGTTGGCGTTGGGGAGGTGATCAAAGGATGGGATGAAGGCATATTAGGAGGAGAAGGAATACCACCCATGCTTGCAGTTACTGTTTATCAGTGGTTTTGTTCATTTTCTAAGATTCTCAATTACCCATTTTATGATCTAGGCGCTGGTTGTAGAGGAGGCAAGTCCACTCCCTTTCCTTCTTCACTATATATATGTCTATGGTTAAACCGTTCTCTTTGGGCAGTTGACAGGAGGACGATAAAGGCATGGAAAAGTGGAATCCTGGTGGTGGTGAGGAGAATGAAGGCATCAAAAGATACGAATGGAGGGTTGATGTCTGTAGTGCAGCGACCAGAGAAAATGAGGGTGATCGAATTTCTCTATTGTGAGCGGAGGAAGTTCAAAGATGAGATTTTTGTTATGAAAATGAGGTTGTAA 639 0.446 MLHSLTKAASAAESAAAPCELTVAASGIAFCHKVLGNGPQAEKGQLIKAHYVGKLENGKIFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGEGIPPMLAVTVYQWFCSFSKILNYPFYDLGAGCRGGKSTPFPSSLYICLWLNRSLWAVDRRTIKAWKSGILVVVRRMKASKDTNGGLMSVVQRPEKMRVIEFLYCERRKFKDEIFVMKMRL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2336 212 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 39 90 IPR001179 GO:0003755
Lele16g2336 212 Gene3D - 15 136 IPR046357 GO:0003755
Lele16g2336 212 SUPERFAMILY FKBP-like 22 101 - -
Lele16g2336 212 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 12 101 IPR044183 GO:0009507
Lele16g2336 212 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 44 90 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2336 Lele-ChrLele16 23637811 23640816 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2336 42 99 Calmodulin-binding Proteins AT5G48570 49.231 2.38e-10 57.8