Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2335 ATGAGTGAGAGTGGTGAGAAACCTGCATGGCTAGAGAGGCTCATGGCGGAGACATTCTTTGGTGGGTGTGGGGTCCACGAGAATCGCAGGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTACCTTAGCATCTGTCCTCACTGTCTCCCTTCTCATCCGTCTCACCCTCTTCTCCAGTATTCTTGTGTTTCTGAGTTCATGAAGAAATATGTTGTAAGTGGTTTCCTGGGAAGGGATCATGATGTGGTGTTTGATTCCCACTTTTTGGTTTTGGTTTCTTTCCCATTAATGGAAGATCTCTTTTTTTATCCAGTTCTACCTGCAAAGGTGAGAAGGTACGTGTACCACGACGTCGTTCGACAGGGTGATCTGGAAAAGCTCATTGATTGTTCCAGTATTCAGGCGTATACGATAAACGGAGCGAAGGTGATATTCTTAAAGCAGAGGCCACAGTCACGGCCATGCAAAGGCCCAGCCAATGCTTGCTGTACCTGCGATCGCATTCTCCAGGACCCTTTCCTCTTCTGTTCTCTCTCTTGCAAGGTAGATCACATGGTGGAGGAAGGGGAGGACCTGTCCGGCATTTTGCACCGATTCTGTGATTCCGACTTAGCCTTCTCCAACTTCGACGCCACCTCCTCCGACCAGGATTCCCAAATTGCCCCTCCCTCCTCTTACGGCTCCTCTGGCAATTCTGGGGATGTCAGGGCTCTCTTGGAATCTGCCAGTTTTGTGTCTGATGATGTAATGGAAATTTTCAAGTATATGTAA 774 0.4819 MSESGEKPAWLERLMAETFFGGCGVHENRRKNEKNVFCLHCYLSICPHCLPSHPSHPLLQYSCVSEFMKKYVVSGFLGRDHDVVFDSHFLVLVSFPLMEDLFFYPVLPAKVRRYVYHDVVRQGDLEKLIDCSSIQAYTINGAKVIFLKQRPQSRPCKGPANACCTCDRILQDPFLFCSLSCKVDHMVEEGEDLSGILHRFCDSDLAFSNFDATSSDQDSQIAPPSSYGSSGNSGDVRALLESASFVSDDVMEIFKYM 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2335 257 Pfam PLATZ transcription factor 112 183 IPR006734 -
Lele16g2335 257 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2335 Lele-ChrLele16 23621014 23625092 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele16g2335 PLATZ 7.6e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g2335 16 23621014 23625092 Lele16g2335 16 23621014 23625092 ECH
Lele13g0065 13 795403 799888 Lele16g2335 16 23621014 23625092 hybridization
Lele14g0064 14 1321137 1325357 Lele16g2335 16 23621014 23625092 hybridization