LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele16g2328	ATGGCTTCAAGAGTAGATACTGATGAAGACAATGAAACCAGAGGTAGCATGTGGGCTTTGGATCAGAAACTTGACCAATCTATGGATGAAGAGGCAGGAAGTCTCAGAAATATGTACGGAGAAAAAAAATATTCTGCACTATTGCTTGTGCGGCTTGCATATCAGAGTCTTGGTGTGGTTTATGGGGATCTGGGAACTTCGCCCTTGTATGTTTTCTACAATACTTTTCCCGATAAAGTGAAAGATCCAGAGGATGTGATTGGAGCTCTTTCTTTGATTATATACTCTCTTACTCTTGTACCACTCCTCAAATATGTTTTCATCGTATTAAGAGCAAATGACAATGGACAAGGTGGAACATTTGCACTTTATTCATTGCTTTGCCGACATGCAAAGATAAAAACAATACCTAACCAACATCGTACTGATGAGGAGCTAACAACTTATAGTCGGTCCACCTTCCATGAAAGGTCATTTGCTGCAAAAACACAGAGATGGTTAGAGGAAAAAGCTTCCAGGAAAAATGCTATTCTTATGCTTGTCCTTGTTGGCACCTGCATGCTTATCGGAGATGGGATTCTTACCCCAGCTATATCTGTTTTATCAGCGGCTGGTGGCATCAAGGTAAATCACCCTGGAGTCGGTAATGGTGTAGTTGTGGTGGTTGCTGTTGTAATCTTGGTTGGGTTATTTAGCATGCAACATTATGGCACAGATAGAGTTAGTTGGCTTTTTGCTCCAATTGTCCTTCTTTGGTTTCTCCTTATTGGAAGCATAGGTATTTTCAACATCTGGAAACATGACAGCAGTGTTCTAAAAGCTTTTAATCCTGTTTATATATATCGGTATTTTAGAAGAGGAGGAATAGATGGTTGGACTTCCCTAGGGGGTATATTGCTCAGCATAACAGGGACAGAGGCTCTATTTGCAGACCTATCTCATTTTCCAGTTTCAGCTGTACAACTAGCATTTACTCTACTTGTTTTTCCTTGCCTTCTTTTAGCCTATTCCGGACAAGCTGCTTACCTTATGAATCACTTGGATCATACCCGGGATGCTTTCTATAAATCGATTCCAGACCGAATATATTGGCCAGTATTTATTGTTGCAACAGCAGCAGCTATAGTTGCAAGCCAAGCCACAATATCTGCAACATATTCAATTATTAAGCAAGCCTTTGCACATGGCTGTTTCCCAAGAGTCAAAGTTATACATACATCAAAGAACTATCTTGGCCAGATATATGTTCCGGATATTAATTGGATCCTTATGATTCTCTGCATCGCGGTTACTGCGGGGTTCGAAAATCAAAGCCAGATTGGAAATGCTTATGGTACTGCAGTGGTGATAGTTATGCTGGTTACAACATTGCTTATGATACTAATCATGATTTTAGTATGGCGCTCCCATTGGATTCTCGTCGTCCTCTTCACTGCCTTATCGTTGATTGTGGAATGCACTTACTTCTCTGCTGTACTTTTAAAAGTGAACCAAGGTGGGTGGGCTCCCCTCGTAATTGCTGGAGCTTTTCTTATAGTTATGTATGTTTGGCACTATGGCACAGTCAAGAGGTACGAGTTCGAAATGCATAGTAAAGTATCTATGGCATGGATTCTCGGGCTTGGCCCAAGTTTAGGACTTGTTCGTGTCCCGGGGATCGGACTAGTCTACACAGAGCTAGCGCGTGGAGTACCTCACATATTTTCTCACTTCATCACCAACCTACCAGCCATCCATTCTGTAGTTGTATTTGTATGTGTGAAATACCTACCTGTCTATACCGTCCCAGAAGAAGAGCGGTTCCTTGTCAAGAGAATAGGACCGAAGAATTTCCACATGTTCCGATGCGTAGCGCGATATGGCTATAAAGATCTGCACAAAAAAGATGACAATTTCGAGAAAAAACTGTTCGATAATCTGTTCATGTTCATTCGGCTCGAGTCCATGATGGAAGGATTCTCAGATTCAGATGAGGAATACAGTTTATGTGATCAGCAGCAACAGCAGCAAGTGGGGAATAACAACAGCAACAACAACACAGCCTCATCTGATATGGAGCCAACAATGTCATCGGTGGATTCAATTGTGCCAGTTAGATCTCCATCACATGTGAATATTGCAGTCATGTCGTCCGGTCTACAAAGCAGCCAGACCGATGTTGACGAACTCGAGTTCCTGAACAATTGCAGGGATGCCGGGGTGGTTCACATACTAGGGAACACAGTTGTGAGAGCAAGAAGGGATTCAAGATTCTACAAGAAAATAGCTGTGGATCACATATATGCACTCCTTAGGAAGATTTGCAGAGAGAACAGTGTGATCTTCAATGTCCCCCATGAGAGTCTTCTAAATGTTGGTCAGGTTTTCTATGTATAG	2376	0.42	MASRVDTDEDNETRGSMWALDQKLDQSMDEEAGSLRNMYGEKKYSALLLVRLAYQSLGVVYGDLGTSPLYVFYNTFPDKVKDPEDVIGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTFALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTFHERSFAAKTQRWLEEKASRKNAILMLVLVGTCMLIGDGILTPAISVLSAAGGIKVNHPGVGNGVVVVVAVVILVGLFSMQHYGTDRVSWLFAPIVLLWFLLIGSIGIFNIWKHDSSVLKAFNPVYIYRYFRRGGIDGWTSLGGILLSITGTEALFADLSHFPVSAVQLAFTLLVFPCLLLAYSGQAAYLMNHLDHTRDAFYKSIPDRIYWPVFIVATAAAIVASQATISATYSIIKQAFAHGCFPRVKVIHTSKNYLGQIYVPDINWILMILCIAVTAGFENQSQIGNAYGTAVVIVMLVTTLLMILIMILVWRSHWILVVLFTALSLIVECTYFSAVLLKVNQGGWAPLVIAGAFLIVMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELARGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDNFEKKLFDNLFMFIRLESMMEGFSDSDEEYSLCDQQQQQQVGNNNSNNNTASSDMEPTMSSVDSIVPVRSPSHVNIAVMSSGLQSSQTDVDELEFLNNCRDAGVVHILGNTVVRARRDSRFYKKIAVDHIYALLRKICRENSVIFNVPHESLLNVGQVFYV	791

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele16g2328	791	MobiDBLite	consensus disorder prediction	664	691	-	-
	Lele16g2328	791	Pfam	K+ potassium transporter	54	624	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele16g2328	791	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	38	789	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele16g2328	791	TIGRFAM	kup: potassium uptake protein	52	791	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele16g2328	Lele-ChrLele16	23522487	23528871	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele16g2328	1	791	Inorganic Solute Cotransporters	AT2G35060	78.058	0.0	1252