Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2316 ATGATTTTTGAGCTATTCTATGACACTGCCCCCTTCGCTGCAGAAAATTTCCGTGCCCTATGTACAGGAGAAAAAGGACTCAGTCCAAACACTCAAAAGCCACTGAGGTACAAGAATACTTACTTTCTTAAGGTTCCGAAAGGTGGCTCCTATGTGGAGGGAGGTGCTTTTTGCTACGCAAATGGGACAGGCGGAGAAAGTATATATGGTTCAAATTTTCCAGATGAACTAAATGAGCCAAAGATGCATACGCATGATGAAAGAGGTCTTCTATCGATAAGAAAAGATGATCGTAATGTCTGTGGTTCTCATTTTATCATCACATTGAAACGTGATGACAGTCTTAACAGCTCTCATGTGGTCTTTGGGAAGCTTGTCGAAGGGTATGATCCACTGAAGGATATTGAAGAGATTGGATTTAGGGTACCTTGTAAAATCATCTTTTGTGGTCATTATGATGAAGATTATGAGTCTTCCTTGGATGGGGACAGGACAGATGTAGAGTCTTCCTCGGATGGGGATAAGACAGTAGATGCAGGACGCACCTCTTTTGGAAGGCCCTATGAACCGGAATTCATGAAAGATGAAGACGATCGCTTAATGGAAGATATTGAAGACGATATTCTGAGAGACAAAAGGTGA 642 0.419 MIFELFYDTAPFAAENFRALCTGEKGLSPNTQKPLRYKNTYFLKVPKGGSYVEGGAFCYANGTGGESIYGSNFPDELNEPKMHTHDERGLLSIRKDDRNVCGSHFIITLKRDDSLNSSHVVFGKLVEGYDPLKDIEEIGFRVPCKIIFCGHYDEDYESSLDGDRTDVESSSDGDKTVDAGRTSFGRPYEPEFMKDEDDRLMEDIEDDILRDKR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2316 213 MobiDBLite consensus disorder prediction 158 175 - -
Lele16g2316 213 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 150 - -
Lele16g2316 213 Gene3D - 1 152 IPR029000 -
Lele16g2316 213 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 139 IPR002130 GO:0000413|GO:0003755
Lele16g2316 213 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 5 20 IPR002130 GO:0000413|GO:0003755
Lele16g2316 213 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 132 IPR002130 GO:0000413|GO:0003755
Lele16g2316 213 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 89 104 IPR002130 GO:0000413|GO:0003755
Lele16g2316 213 MobiDBLite consensus disorder prediction 158 200 - -
Lele16g2316 213 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 138 IPR002130 GO:0000413|GO:0003755
Lele16g2316 213 SUPERFAMILY Cyclophilin-like 2 157 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2316 Lele-ChrLele16 23301165 23305900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2316 3 138 U-box Gene Family AT5G67530 33.088 1.09e-11 61.6