Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2255 ATGAGACTATCTTCATCTAGTTTTAGTCCTCCACCTCCGGAAGGAGAAAAGCGAGTCCTGGATTCAGAACTTTGGCATGCATGCGCTGGCCCTCTTGTTTCCTTACCCGCAGTTGGAAGTCGTGTCGTCTACTTTCCTCAAGGGCACAGTGAACAGGTTGCTGCGTCTACCAACAAGGAAGTGGATGCCCATATTCCTAATTACCCTAGTTTGCCTCCTCAGCTTATTTGTCAGCTTCATAATGTGACCATGCATGCGGATGTTGAGACAGATGAAGTATATGCGCAGATGACCTTGCAAGCACTAAATCCTCAAGAGCAGAAAGAGGCGTACCTTCCAGCAGAGTTGGGCACTCCTAGTAAGCAGCCAACTAATTACTTCTGCAAAACTTTAACAGCCAGTGACACAAGCACACATGGGGGATTCTCTGTTCCACGCCGAGCAGCTGAGAAAGTGTTTCCGCCTCTGGACTTCTCCCAACAACCTCCTTGTCAAGAGCTAATTGCTAGGGATTTGCATGGTAATGAATGGAAATTCAGACATATCTTTCGTGGTCAACCCAAAAGGCATCTGCTTACAACAGGATGGAGTGTGTTTGTGAGTGCTAAAAGGCTTGTTGCTGGTGATTCAGTCCTATTTATCTGGAATGAAAAGAATCAGTTGCTTCTCGGTATCCGGCGTGCAAATCGTCCACAAACTGTGATGCCTTCATCAGTGTTATCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCCGCTGCTCATGCAGCTGCAACAAACAGTCGTTTTACCATTTTCTATAATCCACGCGCTAGCCCATCTGAATTTGTCATACCCTTAGTCAAGTATGTTAAAGCTGTGTATCATACTCGAGTCTCAGTTGGCATGCGCTTCAGGATGCTGTTTGAAACTGAGGAATCAAGTGTGCGGAGATACATGGGCACCATAACTGGTATTAGTGACCTGGACCCTGTTAGATGGCCAAATTCACATTGGCGCTCAGTCAAGGTTGGCTGGGATGAATCTACAGCAGGAGAGAGGCAACCTAGAGTGTCCCTATGGGAAATTGAGCCATTAACAACATTTCCGATGTATCCATCATCTTTTCCCCTTAGGCTTAAACGACCTTGGCCTCCAGGATTGCCTTCTTACCAGGGCATGAAGGATGACAGTTTTAACTTGAGTAATCAACTATTATGGCTTCGAGAAACCACAGACAGAGGTCTTCAGTCTCTTAACTTCCAGGGGTTTGGGTTCAATCCTTGGATGCAGCCAAGGCTCGATCCCTCCATGTTGGCTTCGCCAACTGACATGTACCAAGCTATGGCTAATACTGCAGTTCAGGATATGAGGACTTTGGATCCTTCCAAACAGCATCCTGCATCTTTTCTTCAATTTCAGCATCCACAGAACTTCCCCAATAGGACTGCTGCTTTAATGCAGGCCCAAATGTCCCAGCAGTCTCAACTGCAGCAGGCTTGTCAAAGCAATCAAGAGAATCAGAATTCTTCTCAATCCTTGACTCCAACTCAGATGCAACTTCAGCAGCAGCACTCGTTCAATAATCAGCATCAGCAGCCACAGCAAGTGGTTGATCATCAGCAGATTTCAAGTGCTTCTGCAATGTCTCAGTTTGTATCTACTCCACAACCCCATTCACCGTCCATGCAAACTATGTCTTCACTTTGCCAACAGCATAACTTTTCTGATTCAAATGTGAATTCCATGAATGCATCTATAGTTTCTCCCTTGCACAGTATCTTGGGTTCATTTTCACAGGATGAATCATCCCACCATCTCAACCTACCCAGGACTAGCTCTTGGGTACCTGTTCAGACATCTGCTTGGCCCTCCAAGCGTGTTGCAGTTGATCCTTTACTTTCTTCTGGAGCTTCTCAGTGCACTCTGCCTCAGTTGGAGTTGTTAGGGCAGCCACAAAGTACTATGTCACAGAATATTATTTCGTTGCCTCCTTTTCCTGGTCGGGAGTGTTCAATAGACCAAGAAGGGAGCACTGATCCTCAGAACAATCTTTTGTTTGGTGTTAATATAGAGCCCTCATCTCTTATAGTGCAGAATGGGACGCTGAGCCTCAAGGGAGTTGGCAACAACAATGACTCTGGGATTGAGCCATTTCAGTCATCTAATTACCTGGATACTCCAGGAACTGATTCTTCATTGAATCATGGAATTACTTATAGCATTGCGGAATCAAACTTCCTTGAGATTCCAGATAATGGGGGTCAAGGAAACTCACAAAACAAAACCTTTGTCAAGGTTTACAAGTCAGGGTCCTGCGGAAGATCATTGGATATCACTCAATTCAGCAGCTACCATGAGCTGCGCAGTGAACTTGCCCGAATGTTTGGCCTTGAAGGCAAGTTAGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGATGTTCTCCTCCTCGGTGATGGCCCCTGGCCGGAATTCGTAAGTAGTGTATGGTGTATCAAAATACTTTCTCCCCAAGAAGTGCAGCAAATGGGCAACAATGGTGTCTGTGAGCTTCTGAACTCTCTCCCAATTCAGCGGCTCTCTAATGGTGTCTGTGAGGACTATGCGAGCCATCCTGACCCGAGGAATTTAAGCACTGGGATAGCAACCAATGGTGTGACAATCTAG 2667 0.4616 MRLSSSSFSPPPPEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQALNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLVKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPLRLKRPWPPGLPSYQGMKDDSFNLSNQLLWLRETTDRGLQSLNFQGFGFNPWMQPRLDPSMLASPTDMYQAMANTAVQDMRTLDPSKQHPASFLQFQHPQNFPNRTAALMQAQMSQQSQLQQACQSNQENQNSSQSLTPTQMQLQQQHSFNNQHQQPQQVVDHQQISSASAMSQFVSTPQPHSPSMQTMSSLCQQHNFSDSNVNSMNASIVSPLHSILGSFSQDESSHHLNLPRTSSWVPVQTSAWPSKRVAVDPLLSSGASQCTLPQLELLGQPQSTMSQNIISLPPFPGRECSIDQEGSTDPQNNLLFGVNIEPSSLIVQNGTLSLKGVGNNNDSGIEPFQSSNYLDTPGTDSSLNHGITYSIAESNFLEIPDNGGQGNSQNKTFVKVYKSGSCGRSLDITQFSSYHELRSELARMFGLEGKLEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVSSVWCIKILSPQEVQQMGNNGVCELLNSLPIQRLSNGVCEDYASHPDPRNLSTGIATNGVTI 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2255 888 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 844 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele16g2255 888 Pfam AUX/IAA family 750 840 IPR033389 -
Lele16g2255 888 Gene3D - 125 228 IPR015300 -
Lele16g2255 888 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele16g2255 888 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Lele16g2255 888 SMART B3_2 127 229 IPR003340 GO:0003677
Lele16g2255 888 FunFam Auxin response factor 750 844 - -
Lele16g2255 888 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Lele16g2255 888 FunFam Auxin response factor 291 363 - -
Lele16g2255 888 ProSiteProfiles PB1 domain profile. 755 839 IPR000270 GO:0005515
Lele16g2255 888 MobiDBLite consensus disorder prediction 490 561 - -
Lele16g2255 888 FunFam Auxin response factor 125 229 - -
Lele16g2255 888 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Lele16g2255 888 SUPERFAMILY CAD & PB1 domains 751 830 - -
Lele16g2255 888 CDD B3_DNA 126 227 IPR003340 GO:0003677
Lele16g2255 888 Gene3D - 750 844 - -
Lele16g2255 888 Gene3D - 291 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2255 Lele-ChrLele16 21977819 21983417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2255 654 847 B3 DNA Binding Superfamily AT5G37020 49.239 1.93e-44 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele16g2255 AUX_IAA 1.5e-07 CL0072