Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2249 ATGGATAATGGGGATCTTGATGGCAGTGGAGAAGATGAGTTTCACGGGCAGAGGGGTCGCAAGTACCGGCCCGTGTTGGACAATGATCGTGCCGTACTTGAGATGTCTTCCATGGATCCTGGATCGTCGTCTTCTTCGTATCCTAATCAACCTGCTTCTCTCAAAAATATTAATGTAAATTCGAGTACAAACGTGGGTTCTGATGCGAAAGAAGGGAACTCTCCTCGCCATGCACAGGCTAATGGAATGCAGGGGGAATCCAAATTGGAATTGTTTGGTTTTGATTCTCTTGTCAACATTCTTGGGCTCAAAAGTATGACTGGAGAGCAGCTTCAACAGCCATCTAGTCCTAGAGATGGTGAGAATATTTCCATAGCAGTTGGGCAGCCAAGGCCTGTAGGTCCTCAACTGGGAACAATGATGGGTGTATTCATTCCGTGCTTACAAAGCATATTGGGAATTATCTATTACATTCGGTTCTCTTGGATTGTTGGTATGGCTGGTATAGCAGACGCATTGTTGCTTGTTACTTTATGTGGCTCCTGTACTTTTCTCACCTCAATATCACTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCATACTATCTCATAGGTCGTGCCCTTGGTCCAGAAGTTGGTGTTAGCATTGGTCTTTGTTTCTTTCTGGGGAATGCAGTTGCTGGAGCCCTTTATGTGTTGGGAGCCGTAGAAACATTTTTGAAAGCAGTGCCTAAAGCTGGGATTTTTGGAGAGACAATCACACAAGTTAATGGTACTGCAGTTGCAGAACCAATACACGTTATAAGTTCTCATGATATGCAAATTTATGGAATTGTTGTGACTATTATATTATGCTTTATTGTATTTGGAGGTGTAAAGATGATTAATCGGGTTGCACCTGCTTTTCTTATACCTGTTTTGTTCTCGCTATCCTGCATATTTATGGGGGTTTTCTTGGCAAGAAAGGATAAGCCTGCAGAGGGAATGACGGGACTGAGTTTGGAGACATTTAAAGAAAATTGGAGCTCAGATTATCAAAAGACTGATGCTAATGGAATTCCAGATCCTAATGGATCTGTAAGCTGGGGTTTCAATTCATTGGTTGGGCTCTTTTTCCCAGCTGTGACGGGAATAATGGCAGGTTCAAATAGATCATCATCTCTGAAAGATACTCAGCGATCAATTCCTGTTGGAACCTTAGCTGCTACTCTTGGGACTTCTACTATGTATCTAGTTACTGTTTTCTTGTTCGGTTCTGTTGCAACCAGAAACAAGCTATTAACAGATAGGCTACTTACGGCTACCATTGCTTGGCCTTTTCCATCATTAATCAAAATTGGGATCATTCTTTCAACTCTGGGTGCTGCTCTTCAGAGCTTGACAGGGGCCCCACGTTTGCTTGCAGCAATTGCCAATGATGATATTTTACCTGTTCTTAACTACTTCAAAGTTGTGGATGGCAGTGAGCCTCACCTTGCTACACTTTTCACTACTTTCCTCTGTATTGGGTGTGTCATAATTGGGAATCTGGATCTTATCACTCCAACAGTAACCATGTTCTTCCTTCTATGTTATGCGGGTGTCAACTTGTCCTGCTTCCTTCTGGATCTTCTAGATGCTCCTAGTTGGCGTCCTCGGTGGGCTTTTCATCACTGGAGCTTGTCTCTTGTTGGAGCATTACTTTGTGTAGTGATCATGTTCCTGATCTCTTGGTCATTCACAGTGGTGTCTTTAGCTCTTGCAAGCCTCATATACAAGTATGTCAGTGTCAAAGGAAAGGCTGGGGACTGGGGAGATGGTTTTAAAAGTGCATATTTCCAATTAGCACTTCGCAGCCTTAGGTCACTTGGAGCAAGCCAAGTGCACCCAAAGAATTGGTACCCGATCCCTTTAATATTCTGCCGGCCTTGGGGCAAATTGCCAGAAAATGTACCTTGCCATCCCAAACTAGCAGACTTCGCTAACTGCGTGAAGAAAAAAGGTAGAGGAATGTCGATATTTGTCTCTATACTAGATGGTGACTACCATGAATGTGCTGAAGATGCCAAGGTTGCTTGTAGACAACTAAGTACCTACATTGATTACAAGAATTGTGAAGGTGTTGCTGAGATAGTTGTAGCCCCCAATATGTCAGAAGGCTTTCGTGGTATTATACAGACTATGGGCCTTGGTAATCTTAAGCCGAATATTATCGTGATGCGTTATCCAGAAATATGGCGACGTGAGAACTTGACAGAGATTCCAGCAACCTTTGTTGGGATAATTAATGACTGCATCGTAGCAAACAAAGCAGTAGTCATAGTGAAAGGTCTTGATGAGTGGCCTAATGAGTACCAGAAGCAGTACGGCACAATTGATTTGTATTGGATTGTGAGAGACGGTGGTTTAATGCTTCTTCTCTCACAGCTTCTTCTTACAAAGAAGAGCTTTGAGAATTGCAAGATTCAAGTTTTTTGCATTGCAGAAGAGGATGCAGATGCAGAGGTGCTTAAGGCTGATGTGAAGAAGTTTCTCTATGATCTTCGGATGCAAGCAGAGGTCTTCGTCATAACAATGAAATGGGATGCGAAAATGGATGGTGGCGAGTCTCAGCAAGACGAATCATATGAAGCATTTACTGGCGCGCAGCAAAGAATGGGTGATTACTTAGCCGAAATGAAGGCAACAAAGCGGGACGATGCCCCTCTGATGGCTGATGGTAAGCCTGTGGTTGTGAATGAGAAGCAGGTGGAGAAGTTTCTTTACACAACAATGAAGCTGAATTCTATAATGCTGAAGTATTCAAGAATGGCAGCAGTTGTGCTGGTAAGCCTGCCTCCACCTCCATTGAACCACCCTGCTTATTTCTATATGGAGTATATGGATCTGTTGCTGGAGAAGGTACCCAGGATTTTGATTGTAAGAGGATATCGTAGAGATGTTGTAACTCTATTCACATAG 2952 0.4333 MDNGDLDGSGEDEFHGQRGRKYRPVLDNDRAVLEMSSMDPGSSSSSYPNQPASLKNINVNSSTNVGSDAKEGNSPRHAQANGMQGESKLELFGFDSLVNILGLKSMTGEQLQQPSSPRDGENISIAVGQPRPVGPQLGTMMGVFIPCLQSILGIIYYIRFSWIVGMAGIADALLLVTLCGSCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPKAGIFGETITQVNGTAVAEPIHVISSHDMQIYGIVVTIILCFIVFGGVKMINRVAPAFLIPVLFSLSCIFMGVFLARKDKPAEGMTGLSLETFKENWSSDYQKTDANGIPDPNGSVSWGFNSLVGLFFPAVTGIMAGSNRSSSLKDTQRSIPVGTLAATLGTSTMYLVTVFLFGSVATRNKLLTDRLLTATIAWPFPSLIKIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVVDGSEPHLATLFTTFLCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWAFHHWSLSLVGALLCVVIMFLISWSFTVVSLALASLIYKYVSVKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCVKKKGRGMSIFVSILDGDYHECAEDAKVACRQLSTYIDYKNCEGVAEIVVAPNMSEGFRGIIQTMGLGNLKPNIIVMRYPEIWRRENLTEIPATFVGIINDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKKSFENCKIQVFCIAEEDADAEVLKADVKKFLYDLRMQAEVFVITMKWDAKMDGGESQQDESYEAFTGAQQRMGDYLAEMKATKRDDAPLMADGKPVVVNEKQVEKFLYTTMKLNSIMLKYSRMAAVVLVSLPPPPLNHPAYFYMEYMDLLLEKVPRILIVRGYRRDVVTLFT 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2249 983 MobiDBLite consensus disorder prediction 8 28 - -
Lele16g2249 983 TIGRFAM 2a30: K-Cl cotransporter 74 983 IPR004842 GO:0006811|GO:0015377|GO:0016020
Lele16g2249 983 Gene3D Amino acid/polyamine transporter I 136 600 - -
Lele16g2249 983 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 84 980 IPR004842 GO:0006811|GO:0015377|GO:0016020
Lele16g2249 983 MobiDBLite consensus disorder prediction 37 70 - -
Lele16g2249 983 Pfam Amino acid permease 142 618 IPR004841 GO:0016020|GO:0055085
Lele16g2249 983 MobiDBLite consensus disorder prediction 1 82 - -
Lele16g2249 983 Pfam Solute carrier family 12 784 982 IPR018491 GO:0006811|GO:0016020|GO:0022857
Lele16g2249 983 Pfam Solute carrier family 12 652 773 IPR018491 GO:0006811|GO:0016020|GO:0022857
Lele16g2249 983 FunFam Cation-chloride cotransporter 1 136 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2249 Lele-ChrLele16 21524951 21542074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2249 137 983 Inorganic Solute Cotransporters AT1G30450 82.075 0.0 1437