Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2243 ATGGACTCAAAAACTAGTGCTAGAGCTCCCTCCAAACAGCATCAGAAGATAGCTGCTGAACAAACGGTAGAGGCAAAAGACATCCAGCCTTCTCCATCTCTGGTTTCAAAATTAGGTAAACTTGAACTGTGTACTCCTGAAAGTTCATCAAAATTTTTGCAAAGCACATCAAAACAGAATGCTGGAGAAACTTCTGAAAGCAAGAAGTCAGGAATTTTAAACCAAAAGGGGCTTGCTGATTCCTTGAGCAATAAATGTGGTTCTGTTGCTTCTTCAACTGTCCTTGAGCAGGCATGTGGAGGAGTTGACCATGCTATTAATGAAAATAGGGGTTCGCAGGATAGTTCTATTGGTCAAGAAAAGAAAACACCAGAGTATGGAAGTGTGAAGAAAAGTTCTGTTTCAGCTAAAGTTAGTGATGGGGCATGCAGTTTTGGAAAAACCAGTGTAAGTGCCAAAGTCAGTGATCGAGCTGATTATGTTGAGAGTGGTAAGAGCAGTATCTGCAGAGGAAGCACAAGCAGTGATATCAGTGATGAGAGTACTTGTAGCAGCTTTAGTAGTAGCATAAACAAACCTCACAAGGCAAATGACTTGGGATGGGAAGCCATCCAAGCTGTTCGAGCTAGAGACGGGATGCTGGGTTTAGGTCACTTTAGACTACTGAAGAGGTTGGGTTGTGGGGATATTGGGAGTGTGTACCTCTCAGAGTTGAGTGGAACTAAATGCTATTTTGCAATGAAGGTAATGGACAAAGCATCACTAGCAAGTCGTAAGAAGTTGCTTCGTGCTCAGACTGAAAGGGAAATACTGCAGTCACTGGACCATCCTTTTCTTCCAACATTGTATACTCATTTTGAGACAGAGAAGTTCTCATGCTTGGTAATGGAATTCTGCCCTGGTGGAGACTTGCATACACTTAGGCAGAAACAACCAGGAAAGCATTTTGCTGAGCAGGCAGTAAAATTTTATGTAGCTGAAGTGTTGCTTGCTTTGGAATACCTCCACATGCTTGGAATTGTCTATCGTGACCTCAAGCCAGAGAATGTCCTTGTGAGAGATGATGGGCATATTATGCTCTCTGACTTTGATCTTTCTCTCCGTTGTGCTGTTAGTCCAACTCTTGTTAAAACCTCTTCAACAGAATCAGAGCCTTTAAGAAAGAATCCTGTTTATTGTGTCCAGTCAGCTTGTATTGAGCCACCTTCCTGCATCCAGCCATCTTGTGTTGCTCCTACAACATGCTTTTCACCCCGGCTCTTTTCTAACAAATCAAAGAAGGATAGGAAACCTAAGACTGAAATTGGAAACCAAGTGACTCCATTACCTGAGCTCATTGCGGAGCCTACAGATGCTCGTTCTATGTCTTTTGTTGGAACCCATGAGTATTTGGCTCCTGAGATTATAAAGGGTGAGGGTCATGGGAGTGCGGTTGATTGGTGGACTTTTGGAATCTTTCTATACGAACTGTTATTTGGTAAAACTCCTTTTAAGGGGTCTGGGAACAGAGCTACATTGTTTAATGTTGTAGGCCAGCCTCTCCGATTTCCGGACTCACCTGTTGTGAGTTTTGCAGCTAGGGATCTCATAAGGGGTTTGCTTGTAAAGGAACCACAGCACAGATTGGCATATAAACGTGGGGCTACTGAGATAAAGCAACATCCCTTTTTCGAGGGTGTGAACTGGGCATTGATCCGTTGTGCTACCCCGCCAGAGATACCCAGGCCCGTAGAATATGAGAAGATACCTTCCCCAGCATCTTCAGGCGGTGAAAAGGTGGTCCACCACATGTCAATTACTGATAAAGGTTCTGATAAATATCTTGAATTTGATTTCTTTTAG 1842 0.4327 MDSKTSARAPSKQHQKIAAEQTVEAKDIQPSPSLVSKLGKLELCTPESSSKFLQSTSKQNAGETSESKKSGILNQKGLADSLSNKCGSVASSTVLEQACGGVDHAINENRGSQDSSIGQEKKTPEYGSVKKSSVSAKVSDGACSFGKTSVSAKVSDRADYVESGKSSICRGSTSSDISDESTCSSFSSSINKPHKANDLGWEAIQAVRARDGMLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFAEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKTSSTESEPLRKNPVYCVQSACIEPPSCIQPSCVAPTTCFSPRLFSNKSKKDRKPKTEIGNQVTPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPDSPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPRPVEYEKIPSPASSGGEKVVHHMSITDKGSDKYLEFDFF 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2243 613 MobiDBLite consensus disorder prediction 108 131 - -
Lele16g2243 613 Gene3D Transferase(Phosphotransferase) domain 1 451 575 - -
Lele16g2243 613 MobiDBLite consensus disorder prediction 47 73 - -
Lele16g2243 613 PANTHER FLIPPASE KINASE 1-RELATED 38 580 - -
Lele16g2243 613 FunFam Serine/threonine-protein kinase D6PK-like 217 302 - -
Lele16g2243 613 MobiDBLite consensus disorder prediction 1 73 - -
Lele16g2243 613 MobiDBLite consensus disorder prediction 106 131 - -
Lele16g2243 613 ProSiteProfiles Protein kinase domain profile. 219 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g2243 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 340 352 IPR008271 GO:0004672|GO:0006468
Lele16g2243 613 FunFam Serine/threonine-protein kinase AGC1-7 450 575 - -
Lele16g2243 613 FunFam serine/threonine-protein kinase D6PK-like 303 370 - -
Lele16g2243 613 SUPERFAMILY Protein kinase-like (PK-like) 197 581 IPR011009 -
Lele16g2243 613 Gene3D Transferase(Phosphotransferase) domain 1 303 378 - -
Lele16g2243 613 SMART serkin_6 219 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g2243 613 Pfam Protein kinase domain 220 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g2243 613 Pfam Protein kinase domain 454 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g2243 613 CDD STKc_phototropin_like 218 576 - -
Lele16g2243 613 Gene3D Phosphorylase Kinase; domain 1 217 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2243 Lele-ChrLele16 19624686 19628687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2243 114 613 AGC Kinase Gene Family AT5G47750 82.840 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele16g2243 Pkinase 9.2e-37 CL0016