Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2181 ATGCAGAAGGATTCCAGTCCCCATGCCCATGCCCCATCAACCCCCACTGGTCGGGTTAGGAATCGGAAACGCTCAAATGAGGCCATTCCAGAAGTTGGCAAAGCAAATGGAAATCATTTACTTGTTAATGACAAGAACAAATACAAGTCTATGTGGATTCGTGCATATTCAACACTTTGGATGATTGGTGGCTTTGCTTTAATCATCTACATGGGTCACCTCTATATTACTGCAATGGTGGTTGTTATTCAAATCTTTATGGCAAGAGAGCTTTTCAATTTACTCAGGAGAGCTCATGAAGATAGGCAGCTGCCAGGATTTAGGCTATTAAATTGGCATTTCTTCTTCACCGCTATGTTATTTGTTTATGGACGAATCCTGAGTCAATGTCTTGTCAACACTGTGACGTTGGACAAGGTTTTATATAAGCTTGTGAGCAGCCTTATAAAGTATCATATGGCGATCTGCTACTCCTTGTACATTGCAGGGTTTATGTGGTTCATTCTCACTTTAAAGAAGAAAATGTACAAGTATCAATTTAGCCAGTATGCTTGGACACACATGATTCTGATTGTTGTGTTTACACAATCTTCCTTCACTGTGGCGAACATTTTTGAAGGAATTTTCTGGTTTCTTCTTCCAGCAACACTTATTGTCATTAATGACATTGCTGCTTATATCTTTGGTTTCTTCTTTGGAAGAACCCCATTGATCAAGTTATCTCCTAAGAAAACTTGGGAGGGTTTTATTGGAGCATCCATTGCAACCATAATTTCTGCATTTCTGCTAGCAAACATCATGGGTCGTTCCCAGTGGTTAACCTGTCCAAGGAAGGATTTATCAACTGGTTGGCTTTCCTGTGATCCTGGTCCACTGTTTAAGCCAGAGTCTTACCCCTTACCTGGAACTATTGCTCAATGGCTTCCTTGGAAAGAGATATCAATCCTACCAGTTCAATGGCATGCTTTATGTCTTGGCTTATTTGCATCAATTATTGCACCCTTTGGAGGTTTCTTTGCAAGTGGTTTCAAAAGAGCTTTCAAAATAAAGGACTTTGGTGACAGTATTCCAGGACATGGTGGAATTACTGACAGAATGGATTGTCAGATGGTGATGGCAGTTTTTGCATATATTTATCATCAATCATTTGTTGTGCCGCAAAGTCTGTCAGTTGAAATGATTTTAGACCAGATATTGATGAGCCTAACATTTGAGGAACAAAGAGATCTTTATACGAGGCTGGGTCAGATGTTGAGCGAAGGTATTCAACGGAAGCGTTAG 1281 0.402 MQKDSSPHAHAPSTPTGRVRNRKRSNEAIPEVGKANGNHLLVNDKNKYKSMWIRAYSTLWMIGGFALIIYMGHLYITAMVVVIQIFMARELFNLLRRAHEDRQLPGFRLLNWHFFFTAMLFVYGRILSQCLVNTVTLDKVLYKLVSSLIKYHMAICYSLYIAGFMWFILTLKKKMYKYQFSQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPATLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASIATIISAFLLANIMGRSQWLTCPRKDLSTGWLSCDPGPLFKPESYPLPGTIAQWLPWKEISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFVVPQSLSVEMILDQILMSLTFEEQRDLYTRLGQMLSEGIQRKR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2181 426 PIRSF CDP-DAG_synth_e 1 424 IPR016720 GO:0004605
Lele16g2181 426 Pfam Cytidylyltransferase family 53 383 - -
Lele16g2181 426 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 17 420 IPR016720 GO:0004605
Lele16g2181 426 MobiDBLite consensus disorder prediction 1 25 - -
Lele16g2181 426 ProSitePatterns Phosphatidate cytidylyltransferase signature. 341 367 IPR000374 GO:0016020|GO:0016772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2181 Lele-ChrLele16 17196739 17203342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2181 1 422 Lipid Metabolism Gene Families AT4G22340 84.123 0.0 733
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0597 13 18154731 18156506 Lele16g2181 16 17196739 17203342 hybridization
Lele14g0493 14 16590818 16592659 Lele16g2181 16 17196739 17203342 hybridization