Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2177 ATGGCGGCGTTGTGTTTTCATCCACTTCGACTACCAAAATGGAAGAGGAAAACGTTATTACCAGCGGCTTCGTTGTCTTCTTCTTCTTCATCGTCGTCGAAGAGGCAGTTGAATTGCGATGAGGAGAATTTGGAAAGCAAGAGATTCGATAGTTTGGAATCATGGTCGATGATGTTGGAGTATGAGAATTTGGAGACATGGGAGGCTTCGAAGGAGGATCAGGAAGAATGGACTGCCGATCTTTCTCAGCTTTTTATCGGAAACCGGTTCGCTTCCGGCGCTCACAGTCGGATTTATCGCGGAATTTACAAACAGAGAGCCGTTGCTGTGAAAATGGTTAGAATTCCGACTCAGGACGAAGACAAAAGAACTTTACTGGAGCAGCAATTTAAATCTGAAGTTGCTTTACTTTCAAATCTTTTTCATCCTAATATTGTTCAGTTTATTGCAGCTTGTAAAAAACCACCAATGTACTGTATCATAACAGAATACATGTCACAAGGGAATCTAAGGATGTACCTGAACAAGAAAGAGCCATACTCTCTTTCAACAGAAACAATACTAAGATTAGCTCTTGACGTATCTAGGGGAATGGATTACCTTCATTCACAAGGTGTGATTCACAGAGACCTCAAGTCCAATAACTTGCTTCTGAATGATGAGATGAGGGTTAAGGTAGCAGATTTTGGCACATCATGCCTCGAAACTCGATGCCGGGAAAATAAAGGAAACATGGGGACATATCGTTGGATGGCACCGGAGATGATCAAGGAAAAACATTATACTCGGAAAGTTGATGTTTATAGTTTTGGAATTGTGCTTTGGGAGCTCACGACCGCGTTACTTCCTTTCCAAGGAATGACTCCTGTTCAAGCTGCATTTGCCGTGTCAGAGAAGAACCAAAGGCCACCATTGCCAGAAAGTTGTCAGCCGGCGCTTGCACATCTGATAAAGCGTTGCTGGGCGGTGAATCCATCGAAGCGGCCGGATTTCAGTGAGATTGTGTCTGTTTTGGAAAAGTATGATGAATGTGTCAAGGAGGGCCTACCTCTCACTCATTATTCAGCCTTCGTCACTAAAAATGTCATAATTCGACGCTTAAAAGGTTGTGTGCCCATGAGTTCCTCTATACCTGTACATGCCTGA 1146 0.4337 MAALCFHPLRLPKWKRKTLLPAASLSSSSSSSSKRQLNCDEENLESKRFDSLESWSMMLEYENLETWEASKEDQEEWTADLSQLFIGNRFASGAHSRIYRGIYKQRAVAVKMVRIPTQDEDKRTLLEQQFKSEVALLSNLFHPNIVQFIAACKKPPMYCIITEYMSQGNLRMYLNKKEPYSLSTETILRLALDVSRGMDYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRENKGNMGTYRWMAPEMIKEKHYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVSEKNQRPPLPESCQPALAHLIKRCWAVNPSKRPDFSEIVSVLEKYDECVKEGLPLTHYSAFVTKNVIIRRLKGCVPMSSSIPVHA 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2177 381 PRINTS Tyrosine kinase catalytic domain signature 309 331 IPR001245 GO:0004672|GO:0006468
Lele16g2177 381 PRINTS Tyrosine kinase catalytic domain signature 246 256 IPR001245 GO:0004672|GO:0006468
Lele16g2177 381 PRINTS Tyrosine kinase catalytic domain signature 200 218 IPR001245 GO:0004672|GO:0006468
Lele16g2177 381 PRINTS Tyrosine kinase catalytic domain signature 162 175 IPR001245 GO:0004672|GO:0006468
Lele16g2177 381 PRINTS Tyrosine kinase catalytic domain signature 265 287 IPR001245 GO:0004672|GO:0006468
Lele16g2177 381 ProSiteProfiles Protein kinase domain profile. 84 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g2177 381 SMART serkin_6 84 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g2177 381 CDD STKc_MAP3K-like 91 338 - -
Lele16g2177 381 Pfam Protein tyrosine and serine/threonine kinase 87 338 IPR001245 GO:0004672|GO:0006468
Lele16g2177 381 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 39 341 - -
Lele16g2177 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Lele16g2177 381 FunFam Serine/threonine-protein kinase isoform 1 74 166 - -
Lele16g2177 381 FunFam serine/threonine-protein kinase HT1 167 360 - -
Lele16g2177 381 SUPERFAMILY Protein kinase-like (PK-like) 60 338 IPR011009 -
Lele16g2177 381 Gene3D Transferase(Phosphotransferase) domain 1 167 356 - -
Lele16g2177 381 Gene3D Phosphorylase Kinase; domain 1 73 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2177 Lele-ChrLele16 17165534 17170166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2177 1 371 MAP Kinase Kinase Kinase AT1G62400 81.067 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele16g2177 PK_Tyr_Ser-Thr 4.3e-68 CL0016