Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2167 ATGACGTCGCGTTCGGGATTTAGCAATAGCACGGTTCGAGTGGGCAAGTACGAGTTGGGTCGGACTTTGGGAGAAGGAAATTTCGCCAAAGTCAAGTTTGCGCGCAACACTGAGACTGGTGAAAATGTGGCCATCAAAATTCTTGACAAAGAAAAGCTTCTCAAGCACAAAATGATCGGTCAGTTAAAACGAGAAATTTCAACGATGAAACTGATTAGACATCCAAATGTCATACGTTTGTACGAGGTCATGGCTAGCAAAACAAAGATATACATTGTATTGGAATTTGTGACCGGAGGGGAATTATTTGATAAAATTTCAAGCAAGGGGAGGTTGAAGGAAGATGAAGCCAGAAAATATTTTCAACAGCTTATATGTGCTGTGGATTACTGTCACAGTCGAGGTGTTTTCCATAGAGACCTAAAGCCTGAGAATTTGTTGTTGGATGCTAGTGGAGTACTTAAAGTATCAGATTTTGGATTAAGTGCACTTCCTCAACAAGTCCGTGAAGATGGTTTGCTGCACACAACATGTGGTACGCCAAATTATGTTGCCCCAGAGGTGATCCACAACAAAGGTTATGACGGTGCAAAGGCCGATCTTTGGTCATGTGGTGTTATTCTTTTTGTTCTAATGGCTGGCTTTTTGCCTTTTGAAGAAAGCAACCTTGTAGCTTTGTATAAAAAGATATTCAAGGCTGAGTTCACGTGTCCACCATGGTTCTCTTCAAGTGTAAAGAAGTTAATTAAGAGAATTCTTGATCCCAATCCTGCTTCACGAATTACAATGGCTGAGCTCATCGAGAACGAATGGTTTAAGAAGGGATATACGCCTCCTAGATTTGAGCAGGCCAATGTCAGCCTTGATGATGTAGTTGCTATTTTTGGTGATTCAACGGATTCTGAAAATCTTGTTGTAGAGAGGCGGGAAGAGGAACCAGCAGCACCTCTAACTATGAATGCATTTGAGCTTATCTCTACGTCACAAGGCCTCAACCTTAGCAGTCTTTTTGAGAAGCAAATGGGACTTGTTAAACGGCAGACAAGATTCACATCCAAATGTTCAGCAAACGAGATAATTTCAAAAATTGAGCAAGCGTCAATGCCTTTGGGTTTTGATGTTAAGAAGAACAACTGTAAGTTGAAGATTCAAGGGGAAAAGACTGGACGCAAAGGTCATCTATCTGTAGTAACTGAGGTATTTGAGGTGGCCCCGTCACTATGTATGGTTGAGATTCGCAAAGCTGGAGGAGATACTTTGGAATTTCATAAGTTTTACAAGAATCTGTCCACTGGACTGAAAGACGTTGTCTGGAAAGCGGATCCTATTGATGAAGAACCTGAAGGGGCGAGAGCATCCACATAA 1365 0.4168 MTSRSGFSNSTVRVGKYELGRTLGEGNFAKVKFARNTETGENVAIKILDKEKLLKHKMIGQLKREISTMKLIRHPNVIRLYEVMASKTKIYIVLEFVTGGELFDKISSKGRLKEDEARKYFQQLICAVDYCHSRGVFHRDLKPENLLLDASGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVIHNKGYDGAKADLWSCGVILFVLMAGFLPFEESNLVALYKKIFKAEFTCPPWFSSSVKKLIKRILDPNPASRITMAELIENEWFKKGYTPPRFEQANVSLDDVVAIFGDSTDSENLVVERREEEPAAPLTMNAFELISTSQGLNLSSLFEKQMGLVKRQTRFTSKCSANEIISKIEQASMPLGFDVKKNNCKLKIQGEKTGRKGHLSVVTEVFEVAPSLCMVEIRKAGGDTLEFHKFYKNLSTGLKDVVWKADPIDEEPEGARAST 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2167 454 Pfam NAF domain 316 376 IPR004041 GO:0007165
Lele16g2167 454 FunFam Non-specific serine/threonine protein kinase 8 96 - -
Lele16g2167 454 Gene3D Kinase associated domain 1, KA1 314 439 - -
Lele16g2167 454 Gene3D Transferase(Phosphotransferase) domain 1 97 278 - -
Lele16g2167 454 ProSiteProfiles Protein kinase domain profile. 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g2167 454 ProSiteProfiles NAF domain profile. 314 338 IPR018451 GO:0007165
Lele16g2167 454 SUPERFAMILY Protein kinase-like (PK-like) 13 288 IPR011009 -
Lele16g2167 454 FunFam Non-specific serine/threonine protein kinase 313 439 - -
Lele16g2167 454 CDD CIPK_C 320 435 - -
Lele16g2167 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lele16g2167 454 Gene3D Phosphorylase Kinase; domain 1 6 96 - -
Lele16g2167 454 SMART serkin_6 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g2167 454 Pfam Protein kinase domain 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g2167 454 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 428 - -
Lele16g2167 454 CDD STKc_SnRK3 16 271 - -
Lele16g2167 454 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Lele16g2167 454 FunFam Non-specific serine/threonine protein kinase 10 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2167 Lele-ChrLele16 16975539 16985977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2167 2 446 CBL-interacting serine-threonine protein kinases AT1G01140 68.514 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele16g2167 Pkinase 2e-74 CL0016