Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2137 ATGTACCAAGGAGTTCGTCGCCGGGACAACGACAAGCGGGTTTGCAAGGTTCGTGTTCCTAATAACAACAAATTAAGGATCTGGCTTGGAACTCATTCAGCTCCTGAGAAAGTCGCCACAGCACACGATGTTGCTGCTCTCGTACTTCGTGGTAAGTCGGCTTGTCTCAATTTCATAGACTCCGCGTGGCAGCTTCCTGTGCCGACGTCCATCGATCCCGACGAGATACGACTAGTGGCGAGGGAGGCATTTGACGATGACGAAGTGTATTGTTGCAGTATGGTGACAATGGGATCATTGGGAGAAGCTAACGTTGGTATGAGTGTTGTAGATGAGAAAGAGAAGATGAGAGTTGCAGACTTGATGGGATGGGATAAGAGGAGAATTGAACCAAATGGGTCATAG 405 0.4864 MYQGVRRRDNDKRVCKVRVPNNNKLRIWLGTHSAPEKVATAHDVAALVLRGKSACLNFIDSAWQLPVPTSIDPDEIRLVAREAFDDDEVYCCSMVTMGSLGEANVGMSVVDEKEKMRVADLMGWDKRRIEPNGS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2137 134 SUPERFAMILY DNA-binding domain 2 60 IPR016177 GO:0003677
Lele16g2137 134 CDD AP2 2 61 IPR001471 GO:0003700|GO:0006355
Lele16g2137 134 ProSiteProfiles AP2/ERF domain profile. 1 59 IPR001471 GO:0003700|GO:0006355
Lele16g2137 134 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 86 IPR045277 GO:0003700
Lele16g2137 134 PRINTS Ethylene responsive element binding protein signature 2 13 IPR001471 GO:0003700|GO:0006355
Lele16g2137 134 PRINTS Ethylene responsive element binding protein signature 41 61 IPR001471 GO:0003700|GO:0006355
Lele16g2137 134 SMART rav1_2 1 65 IPR001471 GO:0003700|GO:0006355
Lele16g2137 134 Gene3D AP2/ERF domain 1 60 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2137 Lele-ChrLele16 16287798 16288531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2137 1 83 AP2-EREBP Transcription Factor Family AT1G63030 62.651 4.59e-31 107