Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2109 ATGCGGCTACTTGCCGCCTCTTTAGTTCCTCATCACTTGTTTCCGAGAAATGACCATTCTGTAATCGGCATCTTTGGCTCAATAATTATGGACAACAATTATCATCAGGGTGATTTGACTGACATATTCCGTGCGAGTAGTGGCGGTGGTGGCCGCGGCGGCAGAGCCGGAGGTGGTGGTGGTGGTTCATATGGTACTTCTTCTTCTTCAACATCTGAATTAGCTCCTCATCGTGATCTCTCTTCTTCTTCATTGGAAAGTTGCCAGCACCATCACCACCAGCAGCACCAGCACCAGCACCAGATGAATTTCTCTTCTGTAATAATGGAAGATTCTCTCAGAGCCACCAACTTCTTTGGCGATCCCTTCTCGAACATGCGAGATCCCTTTCTTCAAGACCTTGATTTCCCCTTACCTTCTTCCTACTTCAGTTCTGCTACTAATAATTCTGTCGTGGAAGATGCATCTCCTGGTTTCTCTGCTTCTTCTGTTGTAAATTTGTCTCATCAGAGCAAGCTTGTAGAAGATGATATGAGAGCTAGGCCTCCTCCTGTAGCAGCTTGTAACAACACCACCGCCATATTCTCCAACATGATTCAGATCTCGCCCAGCAGTATGAACGCCGCCGCTGCCAAGTTACCGCTGCCCGTGGTTTCACCGTGTGATTCTCCTCCGGTGAATATGGCCGCCATGAATTCTTCGTCTTCGTCGTTGCCGAGGGGAATTGAGCCATCTTCTTCCTCTTTGGTTTCTGCAGGCAACATGAATATCATTGTGGACAACGCGGCAGTGCAGATCTCGTCTCCAAGGAATCCGGGTCTCAAGCGAAGAAAGAGCCAGGCGAAGAAGGTGGTATGTATACCTGCACCAGCAGCTGCAAATAGCAGACCAAGTAGTGGAGAGGTAGTTCCTTCTGATTTGTGGGCTTGGAGAAAGTACGGTCAGAAGCCCATTAAAGGTTCTCCTTACCCAAGGGGTTACTACAGATGCAGCAGTTCGAAGGGTTGTTCAGCGAGAAAACAAGTAGAGAGAAGCAGAACAGACCCAAACATGCTCGTCATCACTTACACTTCAGAGCACAACCATCCATGGCCGACTCAACGGAACGCTCTCGCCGGCTCAACCCGGTCTCAACCTTCCAAGAACAACAACAACAACAATGCTTCTTCCAAGAACAACCACAATTCCGATCAAGCTTCGATTCAGCCTGTGCCTCGAGATGGAGGTGGCGGCGTGAAGCCGACGAAGGAGGAGGATGACGACCGGCAGCAGCAGGATCATCATCAGAGAGGGAAGAGCGCATCATCATCAGTGAAGGAGGAGATGGAGATAATGGAGATGGAAGATATAACAGAGATGAACCAGAATAATGAACAAGAGCTTGATAATATGATGATGGAAGAAGACGAGAACAATAATAATAATGGATCAGAAGAAGGAGTAGGATACAAGTCATGTATGTTGTTGGAGAGCAATAATAATAATAATCAGACGTCTGAGGATTTCTTTGCAGAATTTGGAGAGATTGAAGCTGACCCACTGAATCTCTTGTTCACTCAAGCGGGTTACAGTGAAGAGCATCATCAGCAGCAGCATCAGAGAGAATCCAAAGCTTTAGATCCTTTCGATCTCTTTGACTGGTCATCAGCATCAACAGATATTCACAACAAATTTGAAGAACCAAAGAGAGGGTTATAA 1698 0.4694 MRLLAASLVPHHLFPRNDHSVIGIFGSIIMDNNYHQGDLTDIFRASSGGGGRGGRAGGGGGGSYGTSSSSTSELAPHRDLSSSSLESCQHHHHQQHQHQHQMNFSSVIMEDSLRATNFFGDPFSNMRDPFLQDLDFPLPSSYFSSATNNSVVEDASPGFSASSVVNLSHQSKLVEDDMRARPPPVAACNNTTAIFSNMIQISPSSMNAAAAKLPLPVVSPCDSPPVNMAAMNSSSSSLPRGIEPSSSSLVSAGNMNIIVDNAAVQISSPRNPGLKRRKSQAKKVVCIPAPAAANSRPSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNNNNNASSKNNHNSDQASIQPVPRDGGGGVKPTKEEDDDRQQQDHHQRGKSASSSVKEEMEIMEMEDITEMNQNNEQELDNMMMEEDENNNNNGSEEGVGYKSCMLLESNNNNNQTSEDFFAEFGEIEADPLNLLFTQAGYSEEHHQQQHQRESKALDPFDLFDWSSASTDIHNKFEEPKRGL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2109 565 MobiDBLite consensus disorder prediction 411 440 - -
Lele16g2109 565 Coils Coil 447 474 - -
Lele16g2109 565 SMART WRKY_cls 304 364 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g2109 565 MobiDBLite consensus disorder prediction 321 440 - -
Lele16g2109 565 MobiDBLite consensus disorder prediction 348 402 - -
Lele16g2109 565 Gene3D WRKY domain 277 358 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g2109 565 MobiDBLite consensus disorder prediction 45 101 - -
Lele16g2109 565 ProSiteProfiles WRKY domain profile. 299 365 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g2109 565 MobiDBLite consensus disorder prediction 62 83 - -
Lele16g2109 565 FunFam probable WRKY transcription factor 14 277 358 - -
Lele16g2109 565 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 69 517 IPR044810 GO:0003700
Lele16g2109 565 SUPERFAMILY WRKY DNA-binding domain 302 365 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g2109 565 Pfam WRKY DNA -binding domain 306 363 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2109 Lele-ChrLele16 15139939 15143971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2109 117 521 WRKY Transcription Factor Family AT1G30650 42.143 7.71e-76 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele16g2109 WRKY 3.4e-25 CL0274