Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2082 ATGTGGCACTTAGAATGGCTGTCTGGGGTTCCTCCCTATAGGATTAGAGTGTATGAGGTCTTGAATAAGAGAGGCTTTTTCTGTGAAGTTATGGCCCTGATGTTGCATGCACGGAAAACGAACAAAAATACTTACAAGATATTCATTACAGCAGAGTATAATGGTGTTGAAGTCAAATTGGCACCACATTTTGAGATGGGTGCTTCTAATAAAACTCCTGAATATCTAAAGATGAACCCCATTGGCAAGGTTCCTGTGCTGGAAACACCACATGGGCCAATATTTGAGAGTAATGCCATTGCTCGCTATGTTGCTAGGATGAAGACTGGCAATGGTTTGTATGGATCTTCTCTAATTGATTATGCTCAAATTGAACAGTGGATTGACTTCTCCTCATTAGAGATTGATGCTAATATTAATGCTTGGTATAGACCAAGAATGGGACAAGCCCCTTACCATCCTCCTGTTGAGGAATTTAAAATTTCAGCACTGAAGAGAGCATTGAGTGCATTGAACACTCACCTGGCTTCTAATACTTATCTGGTTGGGCAATCTATAACCCTAGCTGACATTATTATGACTTGCAATTTGTACAGAGGCTTCACTCGCCTCATGACTAAGAGCTTCACCTCAGAGTTCCCTCATGTTGAGAGATATTTTTGGGCCTTGGTCAATGAGCCCAATTTCAACAAGATCATGGGTGAGGTTAGGCAGACTGAGGCTGTTATCCCTATAGTACCTCTTCAGAAGCCCAAGGAATCCGCCAAGGAGGCCCAACCAAAGGAAGCGGCCTAA 795 0.4264 MWHLEWLSGVPPYRIRVYEVLNKRGFFCEVMALMLHARKTNKNTYKIFITAEYNGVEVKLAPHFEMGASNKTPEYLKMNPIGKVPVLETPHGPIFESNAIARYVARMKTGNGLYGSSLIDYAQIEQWIDFSSLEIDANINAWYRPRMGQAPYHPPVEEFKISALKRALSALNTHLASNTYLVGQSITLADIIMTCNLYRGFTRLMTKSFTSEFPHVERYFWALVNEPNFNKIMGEVRQTEAVIPIVPLQKPKESAKEAQPKEAA 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2082 264 CDD GST_N_EF1Bgamma 35 106 - -
Lele16g2082 264 SUPERFAMILY Thioredoxin-like 29 115 IPR036249 -
Lele16g2082 264 SFLD Glutathione Transferase (cytosolic) 35 221 IPR040079 -
Lele16g2082 264 SUPERFAMILY GST C-terminal domain-like 103 240 IPR036282 -
Lele16g2082 264 CDD GST_C_EF1Bgamma_like 120 240 - -
Lele16g2082 264 Gene3D Glutaredoxin 29 104 - -
Lele16g2082 264 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 31 112 IPR004045 -
Lele16g2082 264 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 31 261 IPR044628 GO:0004364
Lele16g2082 264 FunFam Elongation factor 1B gamma 31 104 - -
Lele16g2082 264 Pfam Glutathione S-transferase, C-terminal domain 163 227 IPR004046 -
Lele16g2082 264 Pfam Glutathione S-transferase, N-terminal domain 42 106 IPR004045 -
Lele16g2082 264 Gene3D - 111 244 - -
Lele16g2082 264 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 117 245 IPR010987 -
Lele16g2082 264 SFLD Main (cytGST) 35 221 - -
Lele16g2082 264 FunFam Elongation factor 1 gamma 110 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2082 Lele-ChrLele16 13098324 13103675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2082 31 264 Eukaryotic Initiation Factors Gene Family AT1G57720 62.821 1.27e-105 310