Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2081 ATGGGTTTGGGACCTGTGAACTCTCACTCTTCAACTCTCCTAGGCGCAGCACTTGAGCTTCGGAAGAACGCCGGCACTATCTTGTATAAGGGCGGCACGTTTATTTCTGAAGCCATGGCGCTGATCCTTCATGCAGGGCAAACTAATAAAAATGCTTACAAGACTCTCATTGCTGCTGAGTACAGTGGTGTGTATGTTAAATTGGCCCCAAATTTTGAGATGGGTGTTTCTAATAAAACCCCTGAATTTATCAAGATGAATCCTATTGGCAAGGTGCCTGTGTTGGAAACACCAGAAGGTCCAGTTTTTGAAAGTAATGCCATTGCTCGCTATGTTTCTAGATTGAAGGGTGACAATGCGTTGTATGGATCTTCTCTAATGGACTATGCTCACATTGAACAATGGATTGATTTTTCATCCCTAGAGATTGATGCTAATATTCTCGCCTGGTTCAGACCAAGAATGGGAAAGGCCACTTACCTTCCTCCTGTTGAGGAAGCTGTAATTTCTGCACTAAAGAGAGCGTTGGGTGCATTGAACACCCACCTGGCTTCTAATACATATTTGGTTGGGCATTCTGTCACCCTAGCAGACATTATTTTGACATGCAATTTGTTTATGGGTTTCACTAAGCTCATGACCAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTCTGGACCTTGGTCAATCAACCCAAATTCCATAAGATCTTAGGTGATGTTAAACAGGCTGAAACTGTTGTACCCATACAATCTGCACAGAAGCCCAAAGAAGCTAAGCCTAAGAAAGAAGCTCAACCAAAGAAAGAGGCCCCTAAAGAGGCTGAAAAGCCCAAAGAGGCTGAAGAGGAGGCGGCACCAAAGCCCAAACCCAAGAATCCTCTTGATCTTCTTCCCCCAAGTAAGATGGTATTGGATGAGTGGAAAAGACTCTACTCAAACACCAAGACTAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGGACATGTATGACCCTGAGGGATACTCTCTCTGGTTCTGTGATTATAAATACAATGAGGAGAATACAGTTTCCTTTGTGACTATGAACAAGGTTGGTGGATTTCTTCAGAGGATGGATCTTGCTCGCAAATATGCATTTGGGAAAATGCTTGTGATCGGATCTGAGCCACCATTTAAGGTGAAGGGGTTGTGGCTATTCCGTGGGCAAGAAATACCACAATTCGTCATTGATGAATGCTACGACATGGAACTGTACGAGTGGAGAAAGGTTGATATCTCAGATGAAGCTCAGAAGGAGCGCGTCAATCAGATGATTGAAGATTACGAACCTTTTGAGGGTGAGCCTCTCTTGGATGCTAAGTGCTTCAAGTAA 1365 0.4381 MGLGPVNSHSSTLLGAALELRKNAGTILYKGGTFISEAMALILHAGQTNKNAYKTLIAAEYSGVYVKLAPNFEMGVSNKTPEFIKMNPIGKVPVLETPEGPVFESNAIARYVSRLKGDNALYGSSLMDYAHIEQWIDFSSLEIDANILAWFRPRMGKATYLPPVEEAVISALKRALGALNTHLASNTYLVGHSVTLADIILTCNLFMGFTKLMTKSFTSEFPHVERYFWTLVNQPKFHKILGDVKQAETVVPIQSAQKPKEAKPKKEAQPKKEAPKEAEKPKEAEEEAAPKPKPKNPLDLLPPSKMVLDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNEENTVSFVTMNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWRKVDISDEAQKERVNQMIEDYEPFEGEPLLDAKCFK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2081 454 Gene3D Glutaredoxin 38 112 - -
Lele16g2081 454 Pfam Glutathione S-transferase, N-terminal domain 40 114 IPR004045 -
Lele16g2081 454 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 39 454 IPR044628 GO:0004364
Lele16g2081 454 SUPERFAMILY GST C-terminal domain-like 111 249 IPR036282 -
Lele16g2081 454 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 294 454 IPR036433 GO:0003746|GO:0006414
Lele16g2081 454 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 294 454 IPR001662 GO:0003746|GO:0006414
Lele16g2081 454 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 39 120 IPR004045 -
Lele16g2081 454 CDD GST_C_EF1Bgamma_like 128 250 - -
Lele16g2081 454 SFLD Glutathione Transferase (cytosolic) 50 228 IPR040079 -
Lele16g2081 454 SUPERFAMILY Thioredoxin-like 38 123 IPR036249 -
Lele16g2081 454 FunFam Elongation factor 1 gamma 118 254 - -
Lele16g2081 454 Pfam Glutathione S-transferase, C-terminal domain 167 235 IPR004046 -
Lele16g2081 454 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 125 253 IPR010987 -
Lele16g2081 454 SMART EF1G_2 293 401 IPR001662 GO:0003746|GO:0006414
Lele16g2081 454 FunFam Elongation factor 1-gamma 1 294 454 - -
Lele16g2081 454 Gene3D - 118 255 - -
Lele16g2081 454 MobiDBLite consensus disorder prediction 259 293 - -
Lele16g2081 454 FunFam Elongation factor 1B gamma 39 112 - -
Lele16g2081 454 Pfam Elongation factor 1 gamma, conserved domain 293 401 IPR001662 GO:0003746|GO:0006414
Lele16g2081 454 SUPERFAMILY eEF1-gamma domain 294 454 IPR036433 GO:0003746|GO:0006414
Lele16g2081 454 SFLD Main (cytGST) 50 228 - -
Lele16g2081 454 MobiDBLite consensus disorder prediction 253 301 - -
Lele16g2081 454 CDD GST_N_EF1Bgamma 43 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2081 Lele-ChrLele16 13090995 13098034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2081 39 454 Eukaryotic Initiation Factors Gene Family AT1G57720 76.202 0.0 638