Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2060 ATGCTTCTAACATTCTACAAAGATGCACGAATACCCACACCCTCCTTCCACGTCACCCTTTTGCCTCCCCACAGCAGCCCCTTGGCGTCTTTCTCGGGTGGTATTACCCTCTTAGGTGCACTTTGCGCCATGGGTAACATCTTTTCTTTTGCTTTGTGGCTCATTGTTCAGGTCCCATTTTTGCTCTGCCGCCTTAAGATGAGTGAGAGATATCCATGCCATTACTCAAGCATGACATTGATGGGTTTAGCCGCTTCAGTGTTCTCTATTGGCTTTACTCTTTGCACTAATGGACTGGTGCTAGCAGGGTTGAATGTGGCGATGATAGGATGCCTCACTTCCTGTACCTCTCCTCCTCTCTCTGTCCTTCTCTCACCATCGTCTCAACAGTTGGTGGCGCTGCGGATTCTTGTGGTGGCGGAAGAGACCATGAGGGACATATATGAGGTGGTGGATGGGTTGAAACCAACCATCCTAATGGTTCTGGTTCAGATATTATACGTTGTAATTAACATTCTTTACAAACTCGTCGTCGTAGACGGCATGAACTTGAGAATTGTCATGGCTTATCGTTTTGTATTTGCCACTGCTTTCATGGCTCCTCTTGCATTCATCTTTGAAAGGAAGAAGAGGCCAAAGATGACTAGGACTATACTGTTTCAGGGACTTATATGTGGCTTATTTGGGGGAACATTGGCACAAACATTATACTTGGAGACATTGGCCTACACAACAGTAACGTTTGCATCGGCAATGGGCAATCTCACTCCAGCCATCACCTTTGTCATGGCCCTCTTCTTTGGCTTGGAAAAATTGAATTGGAAAGCAGTGGCTGGGAAAGCTAAGATCGTGGGAACCATCGTAGGAATTGGTGGGGCCATGCTTCTAACATTCTACAAGGGTGCACGAATCCCCACTCCATCCATTCACGTCTCCGTTTTGCGACCCCTCACAAGCCACGTGGCATCTTCCCACTTCTCTTCCCCCGGGGGTAACATGCTCTTGGGTGCCCTATGTGCCGTGTTTGGTATCTTATCTCACTCTTTGTGGCTCATCATCCAGCGTAAGATGAGTGAGAGATATCCATGTCATTACTCAAGCACGACGTTGATGAATTTGTCAGCTTCAGTGTTTTCTATTGGCTTTGCTCTTTGCACTGAGAGAGATTGGAGTCAATGGAAATTGGGTTGGAACATAAGGCTTTTAACAGTGGCTTATGCGGGCTTGGTGGCAGCAGGAGTGAATGTGGTGATGATAGCATGGTGTGTGCACAAACGAGGGCCTCTCTTTGTGTCTGTGTTTAATCCTCTCTTGCTTTTGTTTTTGGCTTTTGTTGGATCTTTCTTTATGGATGAGACGCTTCACCTTGGAAGTTTAATCGGAGGAGTGCTGATAGTGTGTGGCTTATATCTGGTTTTATGGGGCAAAGGCAAAGAGATGAAGAAGATGAATGTCTTAGACGTACCTTCACAAACCCTCCACGTGTCATCCCCTTCAGTTGAAGTCATCGTCAAATCTTCTATTGATGATCACAAAAGCAACTACAACAACAATACTTCATAG 1563 0.4607 MLLTFYKDARIPTPSFHVTLLPPHSSPLASFSGGITLLGALCAMGNIFSFALWLIVQVPFLLCRLKMSERYPCHYSSMTLMGLAASVFSIGFTLCTNGLVLAGLNVAMIGCLTSCTSPPLSVLLSPSSQQLVALRILVVAEETMRDIYEVVDGLKPTILMVLVQILYVVINILYKLVVVDGMNLRIVMAYRFVFATAFMAPLAFIFERKKRPKMTRTILFQGLICGLFGGTLAQTLYLETLAYTTVTFASAMGNLTPAITFVMALFFGLEKLNWKAVAGKAKIVGTIVGIGGAMLLTFYKGARIPTPSIHVSVLRPLTSHVASSHFSSPGGNMLLGALCAVFGILSHSLWLIIQRKMSERYPCHYSSTTLMNLSASVFSIGFALCTERDWSQWKLGWNIRLLTVAYAGLVAAGVNVVMIAWCVHKRGPLFVSVFNPLLLLFLAFVGSFFMDETLHLGSLIGGVLIVCGLYLVLWGKGKEMKKMNVLDVPSQTLHVSSPSVEVIVKSSIDDHKSNYNNNTS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2060 520 Pfam EamA-like transporter family 156 288 IPR000620 GO:0016020
Lele16g2060 520 Pfam EamA-like transporter family 335 473 IPR000620 GO:0016020
Lele16g2060 520 PANTHER WAT1-RELATED PROTEIN 1 97 IPR030184 GO:0016020|GO:0022857
Lele16g2060 520 SUPERFAMILY Multidrug resistance efflux transporter EmrE 190 290 - -
Lele16g2060 520 SUPERFAMILY Multidrug resistance efflux transporter EmrE 375 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2060 Lele-ChrLele16 12865383 12873058 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2060 144 483 Nodulin-like Gene Family AT1G68170 45.906 3.18e-91 281