Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2053 ATGACAAAGATCGAAGATGTATGGAATGTGGTGCACGGGTTGAAGCCGGCGATGTTAATGGTGGTGGCTCAGATAGCATTCGCAGGCGTCAATGTGTTGTACAAGCTCGCCGTCAATGATGGCATGAACCTCAGAGTCGTGGTTGCTTATCGCTTTATCTTCGCCACTGTTTTCATTGCTCCTATTGCTCTCATTCTGGAAAGGAAGAAGAGACCAAAGATGACTTGGAAGATACTGTTTCAAGCATTTCTTTGTGGTTTATTTGGAGGATCAGTGGCACAAAACTTATACTTAGAAGCATTGTCTTTAACATCAGCAACATTTGCTTCAGCAATGGCCAATCTGATTCCAGCCATCACCTTTATCATGGCCGTCTCCTTCCGGTTGGAAAGTCTAGATATAAGAACAGCAGCAGGAAAAGGCAAGATCATTGGAACAATAACAGGAATAAGTGGGGCTATGATTCTAACATTCTTCAAAGGTGCACAAATAGACACAGGCTCCTTCCACGTCACCCTCATGCATCATCATAACGGACACGTGGCATCGCGGCACTCTTTCTCAGGTGGGAATACCCTCTTAGGTGCTCTCTGCGCTCTGGGAAGCAACTTCAGTTATGCTTTATGGCTCATCATTCAGACTAAGATGAGTGAGAGTTATCCATGTCATTACTCAAGCACAGCTTTGATGAGTCTGATAGGTTCCATCATATCTGTTGCTTTCGCTCTCTGCCTCGAGAGGGATTGGTCTCAGTGGAAGCTGGGTTGGAACGTCAGGCTTCTCACCGCGGCTTATTCGGGAATAGTGGTTTCTGGAGCAATGGTGGTGGTGATGGCCTGGTGTGTACATATGAGAGGCCCTCTTTACGTCTCTGTTTTCAACCCACTTTTGCTTGTCTTTGTGGCCTTGGCTGGCTCTTTCATGTTAGATGAGAAGCTTCATCTGGGAAGTGTAATTGGAGGGGTATTGATAATATGTGGATTATATGCTGTTCTATGGGGAAAACGCAAAGAGATGAAGAAGATGAATCAACTTGTTCCATCTGATCAGAAACTTCATGAAATCATAGTAACATCTCCTACACAAGATCCTAAATGTGCCCCACATGACAATATTAATGATAGTGATGTTGATAAAGTTGTTAGAGATAGTAGTGATGATCATCATCATTCATCAGAAAATGCAAGTGATGATCAAGCTGTGCATGATAATCAGAATAATGAAAGGTAG 1230 0.4358 MTKIEDVWNVVHGLKPAMLMVVAQIAFAGVNVLYKLAVNDGMNLRVVVAYRFIFATVFIAPIALILERKKRPKMTWKILFQAFLCGLFGGSVAQNLYLEALSLTSATFASAMANLIPAITFIMAVSFRLESLDIRTAAGKGKIIGTITGISGAMILTFFKGAQIDTGSFHVTLMHHHNGHVASRHSFSGGNTLLGALCALGSNFSYALWLIIQTKMSESYPCHYSSTALMSLIGSIISVAFALCLERDWSQWKLGWNVRLLTAAYSGIVVSGAMVVVMAWCVHMRGPLYVSVFNPLLLVFVALAGSFMLDEKLHLGSVIGGVLIICGLYAVLWGKRKEMKKMNQLVPSDQKLHEIIVTSPTQDPKCAPHDNINDSDVDKVVRDSSDDHHHSSENASDDQAVHDNQNNER 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2053 409 MobiDBLite consensus disorder prediction 360 409 - -
Lele16g2053 409 PANTHER WAT1-RELATED PROTEIN 15 344 IPR030184 GO:0016020|GO:0022857
Lele16g2053 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 337 - -
Lele16g2053 409 MobiDBLite consensus disorder prediction 369 409 - -
Lele16g2053 409 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020
Lele16g2053 409 Pfam EamA-like transporter family 15 148 IPR000620 GO:0016020
Lele16g2053 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2053 Lele-ChrLele16 12784898 12789782 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2053 14 340 Nodulin-like Gene Family AT1G25270 46.037 3.79e-105 313