LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele16g2050	ATGGGGAGTTTAAGGAATATGTTGAAAGGGTTAAAACCAGTGGTGTTAATGGTGATGGTGCAGACTGCATATGCAGGAGTGAATGTGGCGTTCAAGCTCGCCATTAACGACGGCATGAGCATGAGGATCGCCACCGCCTACCGCCTTCTCTTTGCAACTGCCTTCACTCTTCCTCTTGCTCTCCTTCTTGAGTTAAAAAAAAGACCAAAGCTTACTTGGAGGCTCATTTACATGGCATTCCTTTGTGGCTTGTTTGGGGGAAGTTTATTGCAAAACCTTTACTTCGAGGCTATGGCTTTGACATCAGCAACATTAGTTTCTGCTATTTATAACCTTAATTCACCCATCACTTTCATCATGGCTGTTCTATTCGGCTTAGAAAGATGGAATTTGGGAGCAGCAGGAGGGAAAGCAAAGGTGTTAGGAACTATAATAGGCATTGGTGGGGCAGCAGTTCTCACATTCTTCAAAGGCTTTGAAATTCATATTTGGTCCACACACATTAATCTTTTGCACTCATCACGTCATCATGACGGAAACGTCACAGCAACGGATGAACATCATTTGCTAGGTGTTCTCTGTGCCATCTTGAGTTGCTTCTCCTTTGCCTTATGGCTCATTATTCAGACAAGCATGGGTGGAGAATGTGCAAGCCATCTCTTTAGTGCAGCTTTGATGTCTTCAATGGGAGCAATACAAGCCACTTTGTTTGCTCTCTGTGTTGACAGAGATTGGAAACAATGGAAATTGGGTTGGAATGTTAGGCTTCTAACTGTCTCTTATGCGGGAATTTTTACCTCAGGATTGGTGGTGATTGCCATTGCATGGTGTGTGAAGAAGAGAGGGCCAATGTTTACATCTGTGTTCCAACCTCTAATGCTTGTAGTAGTGGCCATTGCTGCTTCTTTGACCTTGGATGAGAAGCTCTATTTAGGCAGTGTGCTTGGAGCTTTTATGATAGTGTGTGGGTTGTACATTGTGATATGGGGTAAGAACCAAGAAATGAAAATTGAAGCTGAGAAGGTGCAATCAAAACAAGAACAAGAAACTGAGCCCACTGAAGTTGCTGTGTCCAATGGAGTTCATGAATCATGA	1095	0.4329	MGSLRNMLKGLKPVVLMVMVQTAYAGVNVAFKLAINDGMSMRIATAYRLLFATAFTLPLALLLELKKRPKLTWRLIYMAFLCGLFGGSLLQNLYFEAMALTSATLVSAIYNLNSPITFIMAVLFGLERWNLGAAGGKAKVLGTIIGIGGAAVLTFFKGFEIHIWSTHINLLHSSRHHDGNVTATDEHHLLGVLCAILSCFSFALWLIIQTSMGGECASHLFSAALMSSMGAIQATLFALCVDRDWKQWKLGWNVRLLTVSYAGIFTSGLVVIAIAWCVKKRGPMFTSVFQPLMLVVVAIAASLTLDEKLYLGSVLGAFMIVCGLYIVIWGKNQEMKIEAEKVQSKQEQETEPTEVAVSNGVHES	364

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele16g2050	364	PANTHER	WAT1-RELATED PROTEIN	12	344	IPR030184	GO:0016020\|GO:0022857
	Lele16g2050	364	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	47	157	-	-
	Lele16g2050	364	Pfam	EamA-like transporter family	190	328	IPR000620	GO:0016020
	Lele16g2050	364	Pfam	EamA-like transporter family	13	154	IPR000620	GO:0016020
	Lele16g2050	364	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	234	332	-	-
	Lele16g2050	364	MobiDBLite	consensus disorder prediction	341	364	-	-
	Lele16g2050	364	MobiDBLite	consensus disorder prediction	349	364	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele16g2050	Lele-ChrLele16	12735363	12740767	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele16g2050	11	359	Nodulin-like Gene Family	AT1G25270	42.693	5.88e-101	301