Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2020 ATGTGGTGTAGTAAAATTGAAGGTTCCCAGGCCACAGCAAAGCAGACAGCAGAAGTGCTTCGGTCTGTGATTTCTCAACAGCGGTTGCCCCACACAAATCAGGCTTGTGCTCTGATTGATGCAGTAAGATCTGTGGGGGAGCAGCTCATTGCTGCAAATCCTGTTGCTGAGCCATCTTGCTTGGCCCAATGCCATGGATTCCCTCATTCCCAAATCAGTGATTCCCCTAAACCCACTTCTTCCAACAAGCTTGTTTCTGAAAGCCATAGTTCTTCAGTTATTGCTGTTTTGAAAACTATCCCATTACTCAATTCCTGCAGTGATGTTTTATTGTTGTTAATTTTGGATATTTATATAGTTTTCCTATCATTATATGGTATGTTTGTGACTGCAGAGGTAGCTGTGGGTAATATAGTAAGGCGGGTTTTGTACATTATAAGAGAGGAAGATCTTTCCCTTGCAACAGATTCTATTGCTGGTTTGAGAATATCAGCAGGAAGTGACGATGAAGATTATGTGGAGCGAGATGACCATCCTGTTCTATCCGCAGCTGCTGTTGCTGCTGCTGCGAGAAGCACTTTGCGTCCACCATCATTGCAAACTCTTCTAGAGGATATGCCTGATTCAGCTGCAGTTCCACACACTTCTTCTTCAGGGGGTGAATCTGAAGGAAAAAGTAGATCCGACAAAGGTTCCCGAGCACGGAAGCTGAAACATGATGTCATTGAAGCTGTCAATGATCTTATTCAAGATATTGCCACTTGCCATGAACAAATAGCAGAGCAAGCTGTAGAACACATACATCAAAATGAGGTAATATTAACACTAGGAAGTTCAAGAACAGTGCTGGAGTTTCTTTGTGCTGCGAAGGAGAAGAAGAGATCATTTCGGGTCTTTGTTGCTGAGGGTGCCCCGAGATATCAGGGGCATCTACTTGCTAAAGATTTGTCAGCAAGAGGCTTGCAAACGACAGTAATAACTGATTCTGCAGTTTTTGCCATGATATCCCGAGTAAACATGGTTATCGTTGGAGCTCATGCTGTCATGGCTAATGGGGGAGTTATTGCTCCTGTTGGGTTGAATATGGTTGCCCTTGCAGCTCAAAGGCATGCCGTTCCTTTTGTTGTACTTGCTGGGAGTCACAAGTTGTGCCCTTTGTATCCACACAATCCTGAGGTATTGCTGAATGAGCTGAGGTCTCCTTCTGAATTGCTCGATTTTGGGGAATTTTCAGATTGTCTGGATTCTGCAAGTGGCGCTGGTTCTCTTCATGTTGTTAATCCAGCGTTTGATTATGTGCCGCCGAAGCTTGTGAATCTCTTCATTACTGACACAGGTGGCCATAACCCGTCTTACATGTACCGGCTCATAGCTGATTATTACTCTGCTGATGATTTGGTGGTGAAAAGACGAAGTTGTAGAGTGACTGATAAGTCATGA 1440 0.441 MWCSKIEGSQATAKQTAEVLRSVISQQRLPHTNQACALIDAVRSVGEQLIAANPVAEPSCLAQCHGFPHSQISDSPKPTSSNKLVSESHSSSVIAVLKTIPLLNSCSDVLLLLILDIYIVFLSLYGMFVTAEVAVGNIVRRVLYIIREEDLSLATDSIAGLRISAGSDDEDYVERDDHPVLSAAAVAAAARSTLRPPSLQTLLEDMPDSAAVPHTSSSGGESEGKSRSDKGSRARKLKHDVIEAVNDLIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVAEGAPRYQGHLLAKDLSARGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCLDSASGAGSLHVVNPAFDYVPPKLVNLFITDTGGHNPSYMYRLIADYYSADDLVVKRRSCRVTDKS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2020 479 Pfam Initiation factor 2 subunit family 227 450 IPR000649 GO:0044237
Lele16g2020 479 FunFam translation initiation factor eIF-2B subunit beta 255 461 - -
Lele16g2020 479 Gene3D - 255 460 IPR042529 -
Lele16g2020 479 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 131 467 - -
Lele16g2020 479 MobiDBLite consensus disorder prediction 209 236 - -
Lele16g2020 479 SUPERFAMILY NagB/RpiA/CoA transferase-like 127 465 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2020 Lele-ChrLele16 12468946 12472401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2020 5 55 Eukaryotic Initiation Factors Gene Family AT3G07300 82.353 9.25e-19 86.3