Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g2002 ATGGAGAAGTACGAGCTAGTGAAGGACATAGGATCTGGGAATTTCGGGGTGGCCAAGCTGATGCGAAATAAAGATACCAAGGAGCTTGTTGCCATGAAATACATTGAAAGAGGTCACAGGATCGATTTGAATGTAGCCAGGGAAATCATAAACCATAGATCTCTTTGCCACCCGAACATAATTCGGTTCAAGGAGGTGTTTTTGACTCCAACACATCTTGTAATAGTCATGGAGTATGCAGCTGGTGGAGAGCTTTTTGATCGAATTTGCTCTGCTGGAAGATTCAGTGAAGATGAGGCTAGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGCCATTTTTTGCAAATCTGCCATCGAGACTTGAAGCTGGAGAATACCTTATTGGATGACAACCCTGCTCCACGTCTGAAAATTTGTGATTTTGGTTATTCTAAGTCATCTCTACTTCATTCAAGGCCAAAATCAACAGTGGGAACTCCAGCCTATATTGCACCAGAGGTTCTTTCACGTGGAGAATATGATGGAAAGTTGGCTGATGTATGGTCCTGTGGAGTAACTCTTTACGTGATGCTGGTGGGAGCATATCCATTTGAGGACCCAGATGATCCTAAGAACTTCAGAAAAACCATAGATCGGATTATGTCTGTTCAATACAAGATCCCAGAATATGTACACATATCTCAAAACTGTGAGCATCTGCTATCGCACATTTTTGTTGCAAATCCAGTGAAGAGAATAAGCATGAAAGAAATCAAGTGCCACCCATGGTTTTTAAAGAACCTGCCAAGGGAATTGACAGAAACAGCCCAAGCTGTCTACTTCAAGAAAGAAAACCCAACATTTTCTCTTCAGAGTGCAGAAGACATAATGAAAATTGTTGAAGAGGCCAAAACTCAACCCTCAGGTTCTAAGTCGGTCGGAGAGTTTGGCTGGGGAGAGGAAGGAGGAGGAGAAGGAGAAGACAAAGCAAATGATGAGGCAAATGGTGAGGAAGAAGAAGATGAGTATGAAAAGAGGGTCAAGGAGGCACAGACTAGCGGCGAAGCTAATAAGGTTGTGATTTGTAATTTCGTGTTGCAAACCAGACTGAGTTTGTGA 1107 0.4273 MEKYELVKDIGSGNFGVAKLMRNKDTKELVAMKYIERGHRIDLNVAREIINHRSLCHPNIIRFKEVFLTPTHLVIVMEYAAGGELFDRICSAGRFSEDEARYFFQQLISGVSYCHFLQICHRDLKLENTLLDDNPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRGEYDGKLADVWSCGVTLYVMLVGAYPFEDPDDPKNFRKTIDRIMSVQYKIPEYVHISQNCEHLLSHIFVANPVKRISMKEIKCHPWFLKNLPRELTETAQAVYFKKENPTFSLQSAEDIMKIVEEAKTQPSGSKSVGEFGWGEEGGGEGEDKANDEANGEEEEDEYEKRVKEAQTSGEANKVVICNFVLQTRLSL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g2002 368 MobiDBLite consensus disorder prediction 299 348 - -
Lele16g2002 368 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Lele16g2002 368 Coils Coil 329 349 - -
Lele16g2002 368 SUPERFAMILY Protein kinase-like (PK-like) 2 288 IPR011009 -
Lele16g2002 368 PANTHER SERINE/THREONINE KINASE 2 304 - -
Lele16g2002 368 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g2002 368 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele16g2002 368 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g2002 368 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g2002 368 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lele16g2002 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lele16g2002 368 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Lele16g2002 368 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
Lele16g2002 368 CDD STKc_SnRK2 3 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g2002 Lele-ChrLele16 12276502 12281146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g2002 3 263 CBL-interacting serine-threonine protein kinases AT5G35410 42.593 1.18e-63 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele16g2002 Pkinase 2e-69 CL0016