Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1999 ATGTGTCCCCTGCCAGTTCCCGCCATTTTCGGCTCAGAGGAACTCTCTTCAGCTCCTCCTTCTCCTTCTCATTGCGGTGATGGTCCACGCTTTATCTCTCTTCCGATGAAACGTTTTCTGAATACAAACTTTGTTGTTCTTTTATTTGTTGATTTTTCCCTCTTCTTCGATTTTCTGGCTCAACTTCCTCGTATAGTTTCCAGGTTTCTGTCAAGAGGATTCAATTTTGGATCAGTTTATGTATATTCTCCATTTGAAGTGGGCAGCGAAGGTGACAAGCCCCAGAATGAAGGGCTTAAATGTGGCCTTAAAGAACCAACTTTCTTGTATGGTGACTTGGATCTGTATGTATTAGAGGCAAAAAATCTTCCAAATTTGGATCTTTCTTCTGAAACAATGAGAAAATGTTTCACTATGGGTAATACTTGCACCCCTCCCTTCATGAAAGCAAGCAGGATAAGTACTGGGAAATATCATGTAGATACTAGTGATCCCTATGTCTCTGTCATTCTGGCAGGGGCTACTGTAGCTCAAACTCGAGTAGTTCGTAACAATGAGCATCCTTCATGGGATGAGCATTTTATTGTTCCAGTGGCTCACCCTGCTGAGAAAGTAGAGTTTATTGTGAAAGATGATGATGCTCTTGGGGCTGAAATCATTGGAGTCGTAGAGATACCTTCTCAAAAGATTTTTTCTGGAAATACTATTAATGATTGGTTTCCAATCACCGGTGGGTACTCGATTTGCTCAAAAGGTACACCTGAGTTACATATCTCTATTCAGTATAAGCCATTTGGATCAGACCCTTCAGACAAATTTGGCATTGGAGCCGTAGCAGATTATCCAGGTGTTCCGAACACATATTTTCCTCCTCGAAAAGGAGGGAAAGTGACTCTTTATCAAGATGCACATGTACCAGATGGTAAACTACCTGAAATTCCACTTGAGGAGGGAAAAGTCTTTCAGCAGGGTAAATGTTGGGAGGATATTTGCCATGCAATTTCGGAAGCTCATGAGCTGGTATACATTGTAGGATGGTCTGTTTATCACCCTGTAAAGCTTGTCAGAGAACCAACAAGACCCTTGCCTGCTGGAGGAGAGCTTTCACTCGGAGAGTTGTTGAAATATAAGTCACAAGAAGGTGTCCGAGTGGTTATGCTGATCTGGGATGACAAAACTTCGCATGACAATTTTTTTTTGAAAACAGATGGTGTCATGCAGACCCATGATGAAGAAACTAAGAAATTTTTTAAACACTCCACTGTTCATTGTGTGCTTGCTCCACGTTATGCAAGCAATAAGCTCAGTATTTTCAAGCAACAGGTTGTTGGAACCCTTTTTACGCATCATCAGAAGTGTGTGCTTGTTGACACTTATGCTTGTGAGGATAAACGGAACATAACTGCTTTTATAGGTGGTCTAGATCTATGTGATGGCAGATATGATACTCCTGATCATCGGCTCTTTGTTGATTTAGACACAATCTTTCAAAATGACATTCACAATCCGGTATTCCCTTCAAATACTGGAGTACCGAGGGAACCATGGCATGACCTACATTGTAAAGTCGAGGGTCCAGCTGCATATGATATATTGACCAATTTTGAACAAAGATGGGGGAAAGCCAAAAAGTGGCGTGAATTCAAGCTAAAAAGGGTGGCAAATTGGAATGATGATACTTTGCTAAGGTTAGACCGTATTTCATGGATTCTAACTCCATCACCTGGTGCTGCTGGTGACCAAGTTGTTCAGGTAATTGATGAAGATGATCCAGAAAGCTGGAATGTGCAGGTGTTCCGGTCCATAGATTCAGGATCTGTCAAAGGTTTTCCAAAGGATTTTGATGAAGCTAAGGCTCAGCATCTTCTCTGCGGAAAGAACTTAAAAGTAGACAAAAGTATCCATACCGCTTATGTAAAAGTAATAAGATCGGCCCAACACTTCATATATATAGAGAATCAATATTTTCTGGGATCCTCGTATCATTGGCCTTCATATCAACATGCAGGAGCTGATAACTTGGTTCCAATGGAGTTAGCTCTGAAAATTGTCAACAAGATCGATGCAAATGAACGGTTTTCCGTCTATGTTGTCATACCTATGTTTCCAGAGGGACCTCCAACTAGTAATGCTGTGCAGGAAATCTTGTTCTGGCAGGGACAGACAATGTCTATGATGTACGGCATGGTTGCAGATGCCCTTAAAAGAAATGGTCTGTCTGATCAATATCATCCTCAAGATTATCTCAACTTTTATTGCCTTGGAAAGCGTGAACCTCAAACCTGTGACAGTTCCATATCTATGTCAACAGCTGACCGTGGTCTGGCATCGGTTTACAAATATCGACGTTTTATGATTTATGTTCATGCCAAAGGACTGATAGTTGATGATCACTTTGTAATCCTGGGATCTGCAAATATTAACCAAAGATCCCTGGACGGTTCAAGGGACACAGAAATTGTTATTGGCGCCTATCAGCCTCAATATACATGGGCAAGAAAAAATTCTCATCCACATGGTCAGGTGTATGGTTACAGAATGTCACTCTGGGCTGAGCACCTTGGTGGTCTTGAGGATACTTTCAAGGAACCAGACAGCCTCGAATGTGTTCGACGTGTGAACGAAATTTCCAAGAGCAACTGGAACGCATATGTGTCTGAGGAAGAGAAGGAGATGAGGGGACACTTGATGCAGTATCCAGTTCGGATTGGCAATGATGGAAGAGTTAGTTCCTTGAAAGATTGGGAAAACTTCCCTGATGTTGGTGGTAAAATTCTTGGATCACCCAACTCTCTTCCTGATACACTAACCACATAA 2817 0.4175 MCPLPVPAIFGSEELSSAPPSPSHCGDGPRFISLPMKRFLNTNFVVLLFVDFSLFFDFLAQLPRIVSRFLSRGFNFGSVYVYSPFEVGSEGDKPQNEGLKCGLKEPTFLYGDLDLYVLEAKNLPNLDLSSETMRKCFTMGNTCTPPFMKASRISTGKYHVDTSDPYVSVILAGATVAQTRVVRNNEHPSWDEHFIVPVAHPAEKVEFIVKDDDALGAEIIGVVEIPSQKIFSGNTINDWFPITGGYSICSKGTPELHISIQYKPFGSDPSDKFGIGAVADYPGVPNTYFPPRKGGKVTLYQDAHVPDGKLPEIPLEEGKVFQQGKCWEDICHAISEAHELVYIVGWSVYHPVKLVREPTRPLPAGGELSLGELLKYKSQEGVRVVMLIWDDKTSHDNFFLKTDGVMQTHDEETKKFFKHSTVHCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVLVDTYACEDKRNITAFIGGLDLCDGRYDTPDHRLFVDLDTIFQNDIHNPVFPSNTGVPREPWHDLHCKVEGPAAYDILTNFEQRWGKAKKWREFKLKRVANWNDDTLLRLDRISWILTPSPGAAGDQVVQVIDEDDPESWNVQVFRSIDSGSVKGFPKDFDEAKAQHLLCGKNLKVDKSIHTAYVKVIRSAQHFIYIENQYFLGSSYHWPSYQHAGADNLVPMELALKIVNKIDANERFSVYVVIPMFPEGPPTSNAVQEILFWQGQTMSMMYGMVADALKRNGLSDQYHPQDYLNFYCLGKREPQTCDSSISMSTADRGLASVYKYRRFMIYVHAKGLIVDDHFVILGSANINQRSLDGSRDTEIVIGAYQPQYTWARKNSHPHGQVYGYRMSLWAEHLGGLEDTFKEPDSLECVRRVNEISKSNWNAYVSEEEKEMRGHLMQYPVRIGNDGRVSSLKDWENFPDVGGKILGSPNSLPDTLTT 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1999 938 Gene3D C2 domain 110 272 IPR035892 -
Lele16g1999 938 CDD C2_plant_PLD 106 262 - -
Lele16g1999 938 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 784 811 IPR001736 GO:0003824
Lele16g1999 938 SUPERFAMILY Phospholipase D/nuclease 632 869 - -
Lele16g1999 938 PIRSF PLD_plant 100 938 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lele16g1999 938 Pfam Phospholipase D C terminal 858 928 IPR024632 -
Lele16g1999 938 SUPERFAMILY Phospholipase D/nuclease 282 549 - -
Lele16g1999 938 Pfam C2 domain 111 242 IPR000008 -
Lele16g1999 938 SMART pld_4 784 811 IPR001736 GO:0003824
Lele16g1999 938 SMART pld_4 445 480 IPR001736 GO:0003824
Lele16g1999 938 FunFam Phospholipase D delta 317 559 - -
Lele16g1999 938 Pfam Phospholipase D Active site motif 446 480 IPR001736 GO:0003824
Lele16g1999 938 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 109 264 IPR035892 -
Lele16g1999 938 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 445 480 IPR001736 GO:0003824
Lele16g1999 938 Gene3D Endonuclease Chain A 577 835 - -
Lele16g1999 938 PANTHER PHOSPHOLIPASE D 108 927 IPR015679 -
Lele16g1999 938 SMART C2_3c 112 239 IPR000008 -
Lele16g1999 938 Gene3D Endonuclease Chain A 318 561 - -
Lele16g1999 938 ProSiteProfiles C2 domain profile. 94 240 IPR000008 -
Lele16g1999 938 Pfam PLD-like domain 694 822 IPR025202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1999 Lele-ChrLele16 12237667 12247456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1999 108 937 Phospholipase D Gene Family (Wang group) AT4G11850 53.214 0.0 900