Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1997 ATGGCCATACATTTGAAGCTCAGGCTTATTGGTTACTCACAAGATATTGTAGATGGGCAGCCAATTTTTGTTTCTTCAAATTGTTCTCCTGTCAAGGCTTGTAAATTTGAACCTGCAGGCCATGCCTTCCATTCTGCTGCGCTTAAACTACTTGGTATTGAGGAAGAAAAATTAGATGCTGATGATAAAAAAGTGGTTGATGATAATGAACAGAATTATTTTCCATCTGATTCTTATAGCAGCAAGAGTAAAAAGAAATCTGGTTCTGGAGACAAGCAACAAGATCACTATTCATTGTTGGGTTTGGCCCATCTAAGATACCTTGCTACAGAGGATCAAATACGTAAAAGCTATCGTGAAACTGCTTTGAGGTATCATCCTGACAAACAGGCAGCTCTACTTCTTGCTGAGGAGACTGAAGCTGCAAAGCAGGCAAAGAAGGATGAGATAGAAAGTCATTTTAAGGCGATTCAGGAAGCGTATGAAGTTTTAATTGATCCAGTGAAGAGAAGAATCTATGATTCCACAGATGAATTTGATGATGAGTTCCCTACTGACTGTGCCCCACAAGACTTCTTCAAAGTTTTCAGTCCTGCATTTATGAGGAACGGGAGGTGGTCAGTTAATCAACCTATTCCATCTTTAGGTGACAACAACACTCCATTAAAAGAAGTTGATAATTTCTACAATTTCTGGTACACTTTTAAAAGCTGGAGGGAGTTTCCTCATGCTGATGAATTTGATCTTGAGCAAGCTGAATCTCGAGACCACAAGAGGTGGATGGAAAGGCAGAATGCAAAATTGTCAGAAAAAGCAAGGAAGGAAGAGTCTGCACGGATGCGTGCTCTCGTTGATAATGCTTATAAGAGAGACCCTAGAATACTGAGGAGGAAGGAAGAGGAAAAAGCTGAGAGGCAAAGAAAAAAGGAGGCTAAGTTTCTTGCAAAGAGATTGCAGGAAGAAGAAGCTGCCAGAATTGCAGAAGAGGAGAAGCGGCGAAAGGAGGAGGTAGAGAAACGAGCTGCAGAAGCTGCTTTACAACAGAAGAAGTTGAAGGAGAAAGAGAAAAAGCTCTTGCGAAAAGAGCGTGCTCGTCTTCGAACACTTTCAGGACCTATTGTGTCGCAAAATGAAATTGGTATATCTGAGGATGATGTAGAAAGTCTTTGTATGTCACTTGATACTGAGCAGCTGAGGTGTTTGTGTGAGAAAATGGATGGCCTACAGGTGTTAGAACAAGCAAAAGTTCTCAGACATGCGTGTGATTGCAAGAAAGATGGAGAAAGTAAGAAAGAAGAAGAAACAACCAATTGGCAGAATGGTTCTGTTAAGTCTAATGGTAGTGCCTCACAAGTAAACTCAGAGAAGAAGGAAAAACCTTGGAGTAAAGAAGAGATTGATCTATTAAGAAAGGGAATGTTAAAATATCCCAAAGGAACTTCACGAAGGTGGGAGGTCATTTCAGAGTACCTTGGTACTGGACGGTCTGTGGAAGAAATTATGGAGGCAACAAGAACAGTTCTCCTCCAGAAGCCTGATTCTTCCAAATCCTTTGATGCATTTCTCGAGAAAAGGAAACCTGCACAAACAATTGCATCTCCACTGACAACTAGAGAAGAATTAGAAGGGAAATCAACTCCGGCGACCTCCCAAAGTAATGCCTCCTTGACAACAAATAACTCGGAAGACTCTAGCGGCAGCAACAAAATTGCTGAAAACCAAGTCTCTCCTGGTTCTGTCACCGCAAATGGAGTATCCTCTAGTTCAGACCAAGATGTCTGGTCAGCTGTTCAGGAGAGAGCATTGGTTCAGGCTTTGAAAGCCTTCCCAAAGGAAGCTCCCCAGAGATGGGAAAGGGTTGCAACAGCTGTCCCTGGAAAGACCATGAACCAATGCAAGAAAAAATTTGCAATGATGAAGGAGAACTTCAGAAGCAAGAAAAATGCAGCTTGA 1953 0.4183 MAIHLKLRLIGYSQDIVDGQPIFVSSNCSPVKACKFEPAGHAFHSAALKLLGIEEEKLDADDKKVVDDNEQNYFPSDSYSSKSKKKSGSGDKQQDHYSLLGLAHLRYLATEDQIRKSYRETALRYHPDKQAALLLAEETEAAKQAKKDEIESHFKAIQEAYEVLIDPVKRRIYDSTDEFDDEFPTDCAPQDFFKVFSPAFMRNGRWSVNQPIPSLGDNNTPLKEVDNFYNFWYTFKSWREFPHADEFDLEQAESRDHKRWMERQNAKLSEKARKEESARMRALVDNAYKRDPRILRRKEEEKAERQRKKEAKFLAKRLQEEEAARIAEEEKRRKEEVEKRAAEAALQQKKLKEKEKKLLRKERARLRTLSGPIVSQNEIGISEDDVESLCMSLDTEQLRCLCEKMDGLQVLEQAKVLRHACDCKKDGESKKEEETTNWQNGSVKSNGSASQVNSEKKEKPWSKEEIDLLRKGMLKYPKGTSRRWEVISEYLGTGRSVEEIMEATRTVLLQKPDSSKSFDAFLEKRKPAQTIASPLTTREELEGKSTPATSQSNASLTTNNSEDSSGSNKIAENQVSPGSVTANGVSSSSDQDVWSAVQERALVQALKAFPKEAPQRWERVATAVPGKTMNQCKKKFAMMKENFRSKKNAA 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1997 650 SUPERFAMILY Homeodomain-like 459 503 IPR009057 -
Lele16g1997 650 MobiDBLite consensus disorder prediction 425 462 - -
Lele16g1997 650 CDD SANT 460 502 IPR001005 -
Lele16g1997 650 SMART dnaj_3 94 169 IPR001623 -
Lele16g1997 650 ProSiteProfiles SANT domain profile. 589 644 IPR017884 -
Lele16g1997 650 SUPERFAMILY Chaperone J-domain 93 201 IPR036869 -
Lele16g1997 650 ProSiteProfiles dnaJ domain profile. 95 177 IPR001623 -
Lele16g1997 650 ProSiteProfiles Myb-like domain profile. 586 640 IPR001005 -
Lele16g1997 650 MobiDBLite consensus disorder prediction 252 274 - -
Lele16g1997 650 CDD SANT 594 640 IPR001005 -
Lele16g1997 650 MobiDBLite consensus disorder prediction 64 93 - -
Lele16g1997 650 SMART sant 590 642 IPR001005 -
Lele16g1997 650 SMART sant 457 510 IPR001005 -
Lele16g1997 650 Pfam DnaJ domain 95 174 IPR001623 -
Lele16g1997 650 SUPERFAMILY Homeodomain-like 592 647 IPR009057 -
Lele16g1997 650 Gene3D - 584 650 - -
Lele16g1997 650 Pfam Myb-like DNA-binding domain 593 638 IPR001005 -
Lele16g1997 650 FunFam Myb family transcription factor 588 648 - -
Lele16g1997 650 ProSitePatterns Nt-dnaJ domain signature. 154 173 IPR018253 -
Lele16g1997 650 ProSiteProfiles Myb-like domain profile. 453 508 IPR001005 -
Lele16g1997 650 MobiDBLite consensus disorder prediction 529 589 - -
Lele16g1997 650 PRINTS DnaJ domain signature 100 118 IPR001623 -
Lele16g1997 650 PRINTS DnaJ domain signature 149 169 IPR001623 -
Lele16g1997 650 PRINTS DnaJ domain signature 118 133 IPR001623 -
Lele16g1997 650 MobiDBLite consensus disorder prediction 530 589 - -
Lele16g1997 650 CDD DnaJ 95 166 IPR001623 -
Lele16g1997 650 Gene3D - 453 511 - -
Lele16g1997 650 Coils Coil 301 369 - -
Lele16g1997 650 MobiDBLite consensus disorder prediction 438 455 - -
Lele16g1997 650 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 10 649 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Lele16g1997 650 Gene3D DnaJ domain 91 209 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1997 Lele-ChrLele16 12223801 12225753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1997 96 295 C2H2 Transcription Factor Family AT1G74250 28.870 5.55e-19 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele16g1997 DnaJ 6.3e-18 CL0392