Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1992 ATGCTCAGCGATCTGGAATCTTCAATCTGCAAAGGTATTATTTCTGCTTCTATGGCTAATTCAAAGGCTTCATCAGGCATGAGAAATTTTATGTATTCTGGAAAGCATGCTCTCCTTCCTCCTAAAAGTCCATTTCCGAGTATTTCTGGAGCATATGCTGATTATGTCCCAAATACGGCAATTGGTACCAAGATTTTTCAGAAACCTAGAGAGGGAAACATACACCACCAACGGACTTCATCTGAGAGCCTTGTCATAGAGGAACAACCTTCTTGGCTTGACGATCTTCTTAATGAGCCAGATACACCTGTCCGTAGGGGTGGTCATCGTCGTTCATCAAGTGATTCTTTTGCTTACTTAGACACAGTTAATGTTTCTTCTAACATTAGCTATACAGATCAGGATGATTGCAATTATAAGAATTTAAAATCTATTTCATCTCGGGCATCTCAGGACTTTGATTATGGCAAAGATGCTCGTCATTTACCAATGTATTCAGAAATCAAGTCAACCAAAACGAACAATAGAGCATGGGACTCTTTAAATGCCATTTCGCATCAAACACGTGTTCCCTCAGGCAGGGACAATGGTGCATTTCAAAGTTCAGGATCACCTAGCATGCCATGTGAAGCAGCAGATGGGTTTCCTTCAAATGCTAATGAAAAACTGGATTCAGCAGAATCTAGCTCACTTGATATAAAATTATCTTCTGAAAAAAAGGATGGTTTGCATGCAAAGGCACATGCTTCTGAAACAGATACAAAACGAGCTAAACAGCAATTTGCTCAACGATCACGGGTCCGTAAACTACAATACATATCTGAGCTGGAAAGAAACGTACAAGCTTTACAGGCAGAAGGGTCCGAAGCATCAGCTGAGGTTGAGTTTCTTAATCAACAGCATCTTATCCTGAACATGGAGAACAAAGCCCTTAAGCAACGTCTAGAAAGTTTAGCACAGGAGCATCTCATCAAACGCTGGGAGCTGGCAAATATTAACACACCATACTTGTTCTGGGGGCAAAATTATAATTCTAAGACCTTACTCCATTATGGGGTGACTTCTTGTACCACGAAGGCCTGA 1083 0.409 MLSDLESSICKGIISASMANSKASSGMRNFMYSGKHALLPPKSPFPSISGAYADYVPNTAIGTKIFQKPREGNIHHQRTSSESLVIEEQPSWLDDLLNEPDTPVRRGGHRRSSSDSFAYLDTVNVSSNISYTDQDDCNYKNLKSISSRASQDFDYGKDARHLPMYSEIKSTKTNNRAWDSLNAISHQTRVPSGRDNGAFQSSGSPSMPCEAADGFPSNANEKLDSAESSSLDIKLSSEKKDGLHAKAHASETDTKRAKQQFAQRSRVRKLQYISELERNVQALQAEGSEASAEVEFLNQQHLILNMENKALKQRLESLAQEHLIKRWELANINTPYLFWGQNYNSKTLLHYGVTSCTTKA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1992 360 MobiDBLite consensus disorder prediction 233 259 - -
Lele16g1992 360 Coils Coil 266 321 - -
Lele16g1992 360 SMART brlzneu 251 310 IPR004827 GO:0003700|GO:0006355
Lele16g1992 360 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 27 328 IPR044797 -
Lele16g1992 360 CDD bZIP_plant_RF2 253 301 IPR044759 GO:0003700|GO:0006355
Lele16g1992 360 Gene3D - 244 327 - -
Lele16g1992 360 SUPERFAMILY Leucine zipper domain 262 304 IPR046347 GO:0003700|GO:0006355
Lele16g1992 360 MobiDBLite consensus disorder prediction 186 207 - -
Lele16g1992 360 MobiDBLite consensus disorder prediction 186 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1992 Lele-ChrLele16 12187888 12194397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1992 87 325 bZIP Transcription Factor Family AT3G58120 32.197 9.13e-24 97.8