Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1986 ATGGCAGATCACAAGCCAAGCCAAATCACTCCAGCTTCTCCCACTGAATCATCCCCAACAAACCCTTCGAAAACCTTCATTTTCGACATAGAATCACACCAACAAAACCCTAATGATCATCACCAGCAAGATCAGATTGAGGTCGTTGACTATACCCAACGGGCTCAATGGCTTCGAGCCGCTGTCCTCGGAGCCAACGATGGCTTGCTCTCTACGGCTTCACTCATGATGGGTGTTGGTGCCGTAAGAGAGGACATCAAGACGATGATCCTCACCGGAGTTGCCGGTTTGGTCGCCGGAGCTTGTAGCATGGCAATAGGAGAGTTCGTGTCCGTGTACTCGCAGTACGACATAGAAGTATCCCAGCTGAAGAGGAAAGGCAAAGAGGTAAAGAAAGCCGACTTGCCGAACCCATTTTACGCAGCGGTGGCCTCAGCAATCTCCTTTGCCATGGGCGCAGTGGTGCCGCTGCTTGGGGCGGCGTTCATTAAAGATTATAAGGTAAGGTTAGGGGTGGTGGTGGCCGTCGTGAGCCTTGCCTTGTTGGTATTCGGAGTTCTAAGTGCAGTTTTGGGGAAAGCTCCTATGGTAAAGTCGTCTTTGAGGGTTTTATTTGGAGGTTGGGTGGCCATGGCAATCACTTTTGGCTTAACAAAGGCCGTGGGTTCCATTGGGTTTTGA 681 0.5095 MADHKPSQITPASPTESSPTNPSKTFIFDIESHQQNPNDHHQQDQIEVVDYTQRAQWLRAAVLGANDGLLSTASLMMGVGAVREDIKTMILTGVAGLVAGACSMAIGEFVSVYSQYDIEVSQLKRKGKEVKKADLPNPFYAAVASAISFAMGAVVPLLGAAFIKDYKVRLGVVVAVVSLALLVFGVLSAVLGKAPMVKSSLRVLFGGWVAMAITFGLTKAVGSIGF 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1986 226 Pfam VIT family 132 218 IPR008217 GO:0005384|GO:0030026
Lele16g1986 226 Pfam VIT family 58 132 IPR008217 GO:0005384|GO:0030026
Lele16g1986 226 MobiDBLite consensus disorder prediction 1 25 - -
Lele16g1986 226 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 33 221 IPR008217 GO:0005384|GO:0030026
Lele16g1986 226 MobiDBLite consensus disorder prediction 8 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1986 Lele-ChrLele16 12144570 12145250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1986 30 226 Nodulin-like Gene Family AT3G43660 68.182 6.95e-97 279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0509 13 17280521 17281180 Lele16g1986 16 12144570 12145250 hybridization
Lele14g0434 14 16025456 16026136 Lele16g1986 16 12144570 12145250 hybridization