Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1982 ATGGCTTCCCATGAACCTGGAGTTCATATCTCACTGAACAAGGTGGGAGCAGTTCTAAACCATGCAGGTGAAAAAGGTAATACTCAAGAGGATGGAAGTAACAATTTTGATTACTCTCAGAGGGGACAATGGCTTCGAGCTGCAGTTTTGGGAGCCAATGACGGGCTGGTCTCGGTTGCTTCATTGATGATGGGTGTTGGAGCTGTGAAAGAAGATGTGAGGGCCATGCTTCTTGCTGGTTTTGCAGGTACAATCGCAGGAGCCTGTAGTATGGCCATAGGAGAATTTGTGTCTGTGTACACTCAATACGATGTAGAGCTTATGCAGATGGAGAGAGATCAGAAAGACGTGAAAGAAACTGGGGAGACGGACGAAAGGAAGATATTACCTAATCCATTTCAGGCTGCTTTGGCTTCTGCATTCTCATTCTCAGTGGGCGCGCTCGTGCCTTTGCTTGCTGCTGCATTCATAAAAAACTACAAGGTGAGGCTAATGGTGGTTGTGTTTGTGGCTAGCTTGGCTCTTCTGGTGTTTGGAGGTTTGGGAGCTGTGTGGGGAAAGACTCCTGTGGTTAGGTCTTGTTTTAGGGTTCTGGTTGGAGGATGGATAGCTATGGCTATCACTTTTGGGTTAACCAAATCATTGGATTCTGGAGGAGTGCAGTTATGA 669 0.4679 MASHEPGVHISLNKVGAVLNHAGEKGNTQEDGSNNFDYSQRGQWLRAAVLGANDGLVSVASLMMGVGAVKEDVRAMLLAGFAGTIAGACSMAIGEFVSVYTQYDVELMQMERDQKDVKETGETDERKILPNPFQAALASAFSFSVGALVPLLAAAFIKNYKVRLMVVVFVASLALLVFGGLGAVWGKTPVVRSCFRVLVGGWIAMAITFGLTKSLDSGGVQL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1982 222 CDD Nodulin-21 43 189 - -
Lele16g1982 222 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 28 216 IPR008217 GO:0005384|GO:0030026
Lele16g1982 222 Pfam VIT family 125 212 IPR008217 GO:0005384|GO:0030026
Lele16g1982 222 Pfam VIT family 45 124 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1982 Lele-ChrLele16 12120203 12120871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1982 27 220 Nodulin-like Gene Family AT3G43660 64.948 2.50e-87 254