Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1981 ATGGCTTCCTTTACCACTCACAACAATGGAACTTCACAAAACGACATGGTCATTGAGATTCCCAACCATCATACAAATGGAACAACAACTCAGCCAAACCCTAACCCTAACCCTAAGCCCAGTAGTCTACCCACCACCACTTCCATCAGAGAAAACCCTAACAAGGACGACGATGATGAGGACACAGATTACTCTCAGAGGGCTCAATGGCTTCGTGCCGCCGTGCTGGGAGCCAACGACGGGCTCGTCTCCGTCGCCTCGATCATGATGGGCGTCGGAGCCGTGAAGGAAGATATCGCAGCCATGCTCCTCTCCGGGTTCGCGGGGCTCGTCGCCGGAGCTTGCAGCATGGCCATAGGAGAGTTTGTCTCCGTGTACACACAGTACGACATAGAGAAAGAACAACTCAAAAGAGAAGAAGAAGAAGGCGAAAGTACTGATAATATTGAAGAGAAGAAGAAGAAGCTGCCAAGTCCATATCAAGCAGCTCTGGCATCAGCACTAGCGTTCTCTGTAGGTGCAGCGCTTCCATTGCTGGGAGCTGTGTTCATAAGAGACTACAAAATTAGGTTAAGTGTGGTTGCCGCAGTGGTGAGCTTGGCCTTGATTGTGTTTGGAGGCGTAGGAGCAGTGCTTGGTAACACTTCTGTGAAGAAGTCGTGCATGAGGGTTCTTATTGGAGGTTGGACCGCCATGGGCATAACCTTTGGCCTCACCAAGTTGATCGGAGCCACTGGTCTTTGA 744 0.5081 MASFTTHNNGTSQNDMVIEIPNHHTNGTTTQPNPNPNPKPSSLPTTTSIRENPNKDDDDEDTDYSQRAQWLRAAVLGANDGLVSVASIMMGVGAVKEDIAAMLLSGFAGLVAGACSMAIGEFVSVYTQYDIEKEQLKREEEEGESTDNIEEKKKKLPSPYQAALASALAFSVGAALPLLGAVFIRDYKIRLSVVAAVVSLALIVFGGVGAVLGNTSVKKSCMRVLIGGWTAMGITFGLTKLIGATGL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1981 247 MobiDBLite consensus disorder prediction 21 65 - -
Lele16g1981 247 CDD Nodulin-21 69 216 - -
Lele16g1981 247 MobiDBLite consensus disorder prediction 51 65 - -
Lele16g1981 247 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 52 242 IPR008217 GO:0005384|GO:0030026
Lele16g1981 247 Pfam VIT family 153 239 IPR008217 GO:0005384|GO:0030026
Lele16g1981 247 Pfam VIT family 71 153 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1981 Lele-ChrLele16 12115285 12116028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1981 52 247 Nodulin-like Gene Family AT3G43660 65.482 2.55e-89 261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0516 13 17352162 17352557 Lele16g1981 16 12115285 12116028 hybridization
Lele14g0438 14 16048955 16049689 Lele16g1981 16 12115285 12116028 hybridization