Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1978 ATGCCGGGCGGCGGATCCGACCCATCAATTCGTCCAGAGTTCCTACCAGTGCTGACATCAAGGTGCCCGAAGAACGGCGATGTGAACGTCCGACTAGCAATGGATGAAGGGAGCGAAAGGGAATTCGACGAGCACATATTACAGAATATAAGGCAAGGATTTGCAGTGTTGGAGTCAGATGCAAAGCTAGTCGATGATGAAAACACAAGAAGTGTCATTGAATCATACTTTGATCCAACGTTTGCGGCATCTTTTGAGGCTGAATTCGTTGATTCTATTGTGAAGATGGGCCAAATTGGAGTCAAGACTGGTTCACTTGGAGAGATTAGGCGTACGTGA 339 0.472 MPGGGSDPSIRPEFLPVLTSRCPKNGDVNVRLAMDEGSEREFDEHILQNIRQGFAVLESDAKLVDDENTRSVIESYFDPTFAASFEAEFVDSIVKMGQIGVKTGSLGEIRRT 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1978 112 Gene3D Peroxidase, domain 2 5 96 - -
Lele16g1978 112 PRINTS Plant peroxidase signature 33 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele16g1978 112 PRINTS Plant peroxidase signature 49 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele16g1978 112 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele16g1978 112 PANTHER - 5 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele16g1978 112 Gene3D - 97 111 - -
Lele16g1978 112 SUPERFAMILY Heme-dependent peroxidases 4 111 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele16g1978 112 ProSiteProfiles Plant heme peroxidase family profile. 1 112 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1978 Lele-ChrLele16 12096833 12098666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1978 5 111 Peroxidase AT1G77100 46.789 3.92e-30 107