Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1976 ATGAATATGAAGCCCAGAACAGAGGAGTTTCGGCCCCAAAGAAGTGTTTGCTCTCTGCTAGGGTCTCTCTATCTTGGAGTTTGGGTGGTGAACGTTCCGAAGACCAAGAAGACTTACTGCAAGAATAAAGAATGCAAGAAGCACACCTTACATAAGGTAACACAATACAAGAAAGGCAAAGATAGCCTTGCAGCTCAGGGTAAGCGGCGTTATGACCGCAAACAGTCTGGATATGGTGGCCAGACAAAGCCTGTCTTCCACAAGAAGGCAAAAACCACCAAGAAAATTGTCTTGAGGCTGCAGTGTCAGAGATGTAAGCATTTTGAGATCGGTGGTGATAAGAAGGGGAAGGGAACCTCTCTGTTTTAG 369 0.458 MNMKPRTEEFRPQRSVCSLLGSLYLGVWVVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQRCKHFEIGGDKKGKGTSLF 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1976 122 MobiDBLite consensus disorder prediction 56 76 - -
Lele16g1976 122 SUPERFAMILY Zn-binding ribosomal proteins 30 108 IPR011332 GO:0006412
Lele16g1976 122 MobiDBLite consensus disorder prediction 56 85 - -
Lele16g1976 122 FunFam 60S ribosomal protein L44 29 122 - -
Lele16g1976 122 Gene3D - 29 122 - -
Lele16g1976 122 Pfam Ribosomal protein L44 47 108 IPR000552 GO:0003735|GO:0005840|GO:0006412
Lele16g1976 122 ProSitePatterns Ribosomal protein L44e signature. 91 102 IPR000552 GO:0003735|GO:0005840|GO:0006412
Lele16g1976 122 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 30 122 IPR000552 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1976 Lele-ChrLele16 12090965 12094087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1976 29 122 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 86.667 4.25e-59 176