Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1975 ATGGCAGATAATTACTCTGTGAATCTTCCTCCTGGGTTCAGATTCTATCCCACTGATGAAGAACTGATAGTTCATTTCCTTCACAGAAAAGCTTCACTCCTACCTTGCCACCCTGATGTCATCCCTGACCTCGAGCTCTATCCCTACGATCCATGGGACCTCCAAGGGAAGGCTCTTGGGGAGGGAAACCAATGGTACTTCTATAGCAGGAGGACTCAGAATAGGGTTACAGTGAATGGGTATTGGAAGGCAATGGGAATGGAAGAGGCAGTGATTGCAGCAAGCAATAATAAGAGAGTTGGAATGAAGAAATATTTCGTGTTTCATGAAGGAGAACCTCCTAATTCTGGTATTAAAACCAACTGGGTAATGCAAGAGTACCGCCTTTCAGATTCTTCTTCTTCCTCTTCCTCCTCCTCTAGAAGAAGATCACAACCAAAACCAGATTACAGTAAGTGGGTGATTTGTCGAGTTTATGAAGTTGATAACGACGACGACGATGAAGATGGTGGTGGTGATAATGGAATAGAGCTGTCTTGTTTGGATGAAGTGTTCTTGTCCATGGATGATCTTGAAGAAATAAGCTTACCCATTAGTTATTAG 603 0.4312 MADNYSVNLPPGFRFYPTDEELIVHFLHRKASLLPCHPDVIPDLELYPYDPWDLQGKALGEGNQWYFYSRRTQNRVTVNGYWKAMGMEEAVIAASNNKRVGMKKYFVFHEGEPPNSGIKTNWVMQEYRLSDSSSSSSSSSRRRSQPKPDYSKWVICRVYEVDNDDDDEDGGGDNGIELSCLDEVFLSMDDLEEISLPISY 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1975 200 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Lele16g1975 200 Pfam No apical meristem (NAM) protein 10 129 IPR003441 GO:0003677|GO:0006355
Lele16g1975 200 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Lele16g1975 200 FunFam NAC domain-containing protein 104 18 164 - -
Lele16g1975 200 SUPERFAMILY NAC domain 6 159 IPR036093 GO:0003677|GO:0006355
Lele16g1975 200 PANTHER NAC TRANSCRIPTION FACTOR 56 9 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1975 Lele-ChrLele16 12081263 12082068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1975 8 160 NAC Transcription Factor Family AT1G69490 45.342 1.42e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele16g1975 NAM 3.7e-32 No_clan