Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1971 ATGAGTGATATCCCTTCTTCGATTCTCAATTTGATAAATTTACAAGACTTTGATGTTTCTCGTGACATTTTAGATGGTAATAAAGAATTACTAGGTCTAAAGAAAATACATAAAGAGCTTGCATACACTTTAGTTGTGACTGAAAGATGTGATGTTTATAGTTTTGGAGTTGTGACATTAGAAACAATCCTCGGAAGACATCCTAAAGATTTGATATCATCTTTACCAAACACCTGCACCCAAAGCACTTTGCTTAAAGATGTCTTAGATCCACGTCTTCCATTGCCATCAGGGAAAGATGCACAAGATGTGACTCTTTTGGTCACAATAGCATTGGCATGCTTGAATCCATCTCCCACATCTCGACCATCAATGCACCAAATGTCTCAAAGGCTTTTATCCTCCAACCTTTCATTTGCCATTCCTTTCAATAATATCTCAATCCAGGATTTAGTGAATTAA 462 0.3636 MSDIPSSILNLINLQDFDVSRDILDGNKELLGLKKIHKELAYTLVVTERCDVYSFGVVTLETILGRHPKDLISSLPNTCTQSTLLKDVLDPRLPLPSGKDAQDVTLLVTIALACLNPSPTSRPSMHQMSQRLLSSNLSFAIPFNNISIQDLVN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1971 153 Pfam Protein tyrosine and serine/threonine kinase 11 132 IPR001245 GO:0004672|GO:0006468
Lele16g1971 153 PANTHER LEUCINE RICH REPEAT KINASE 2 36 137 - -
Lele16g1971 153 SUPERFAMILY Protein kinase-like (PK-like) 12 138 IPR011009 -
Lele16g1971 153 Gene3D Transferase(Phosphotransferase) domain 1 9 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1971 Lele-ChrLele16 12036418 12038387 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1971 36 142 Receptor kinase-like Gene Family AT4G28490 34.513 6.34e-13 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele16g1971 PK_Tyr_Ser-Thr 8.6e-07 CL0016