Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1968 ATGACAAATTTAGAAAACTTTGATGTTTCCCAAAATCAATTATGTGGTAGCATGCCAGAAGAGATTGGACCTCTATATAGCTTTTATCATCTAAATATCTCCCGAAATAATCTGAGTGGAAACGTGCCCTTCGTTTTGAATGATTTTGATTTTGATGGTGACTTTAGTCACAACAATTTCAATGGAAAATTACCATCTAGTATATGCAGTGTTCCACGGATGTGTAGCATTGATTTGAGTTACAATAATATCTCTGGTAGTATACCTAGAGAATTTGATGGTAATAAAGACTTACTTGGTCCAGAGAAGATAGATGATCCTTCTAAAGAGCTCGCATACACCTTAGTTGTGACTGAAAAATGTGACGTGTATAGTTTTGGAGTTGTGACATTAGAAACAATCATTGGAAGACATCCTGGAGATTTGATATCATCTTTGTCAAGGACATGTACTGAAAGCATTTTGTTAAAAGATGTGTTAGACCAACGTCTCCCACAGCCATCACAGAAAGATGCACAATGTGTGACTCTTTTGGTGACAATAGCATTAGCATGCTTGAATCCATCTCCAAAACCTCGACCATCAATGAAACAAGTGTCGCAATGTCTTTCATCCTCCAACCTGCCATTTTCCATACCTTTCAATGATGTATCAATCCAGCATTTAGTGAATCAAGATATGCAAATAATCTAG 693 0.3651 MTNLENFDVSQNQLCGSMPEEIGPLYSFYHLNISRNNLSGNVPFVLNDFDFDGDFSHNNFNGKLPSSICSVPRMCSIDLSYNNISGSIPREFDGNKDLLGPEKIDDPSKELAYTLVVTEKCDVYSFGVVTLETIIGRHPGDLISSLSRTCTESILLKDVLDQRLPQPSQKDAQCVTLLVTIALACLNPSPKPRPSMKQVSQCLSSSNLPFSIPFNDVSIQHLVNQDMQII 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1968 230 SUPERFAMILY Protein kinase-like (PK-like) 110 214 IPR011009 -
Lele16g1968 230 PANTHER LEUCINE RICH REPEAT KINASE 2 2 98 - -
Lele16g1968 230 SUPERFAMILY L domain-like 2 98 - -
Lele16g1968 230 Pfam Protein tyrosine and serine/threonine kinase 110 203 IPR001245 GO:0004672|GO:0006468
Lele16g1968 230 Gene3D Transferase(Phosphotransferase) domain 1 98 205 - -
Lele16g1968 230 Gene3D Ribonuclease Inhibitor 54 97 IPR032675 -
Lele16g1968 230 Gene3D Ribonuclease Inhibitor 1 53 IPR032675 -
Lele16g1968 230 ProSiteProfiles Protein kinase domain profile. 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1968 Lele-ChrLele16 12016952 12018570 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1968 66 204 Receptor kinase-like Gene Family AT1G25320 29.054 9.54e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele16g1968 PK_Tyr_Ser-Thr 4.8e-07 CL0016