Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1966 ATGACAAATCCCAAGAACTTATATTTGTCCTCAAATTTATTCACTGCAGGTGATATCCCTCGCTCGATTTTCAATTTGAAAGATTTACAAGACTTTGAAGTTTCTCAAAATCAATTAAGTGGTAACATGCCAGAACAGCTTGGAAATTTCCATCATTTAGATATCTCCCAAAACAATCTCAGTGGAAAAGTGCCCTACATTTTGAACAATTATTTTCACTTTCATGGAAAATTTAGTCGCAACAAATTCAATGGAACATTACCATCTAGTTTATGCAGTGTTCCACAAGAGTGTAACATTGATTTGAGCTACAACAATATCTCTGGTAGTATACCTAGAGAACTTGAGCTCGCATACACCTTAGTTGTGACTGAAAAATGTGATGTTTATAGTTTTGGAGTGGTGGTGCTGGAAACAATCATGGGAAGACACCCTAGAGATTTAATACTATCTTTATCAAAGACTTGCATTGAAAGCATTTTGTTGAAAGATGTCTTAGACCAACGTCTCCCACTGCCATCTCAGACAGATGCACAAGATGTGACTCTTTTGGTGACAATAGCATTAGCATGCTTGAATCCATCTCCCAAATCTCGACCATCAATGCAACAAGTGTCTCAAAGGTTTTTATCCTGCAACCTGCCATTAGCCATTCCTTTCAATAATATCTCAATCCAGCAGCATTTGGTGAATAAAGATATGCAAATAATCGAGTAA 717 0.3668 MTNPKNLYLSSNLFTAGDIPRSIFNLKDLQDFEVSQNQLSGNMPEQLGNFHHLDISQNNLSGKVPYILNNYFHFHGKFSRNKFNGTLPSSLCSVPQECNIDLSYNNISGSIPRELELAYTLVVTEKCDVYSFGVVVLETIMGRHPRDLILSLSKTCIESILLKDVLDQRLPLPSQTDAQDVTLLVTIALACLNPSPKSRPSMQQVSQRFLSCNLPLAIPFNNISIQQHLVNKDMQIIE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1966 238 SUPERFAMILY L domain-like 5 121 - -
Lele16g1966 238 Gene3D Ribonuclease Inhibitor 1 115 IPR032675 -
Lele16g1966 238 ProSiteProfiles Protein kinase domain profile. 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1966 238 Pfam Protein tyrosine and serine/threonine kinase 116 208 IPR001245 GO:0004672|GO:0006468
Lele16g1966 238 SUPERFAMILY Protein kinase-like (PK-like) 116 220 IPR011009 -
Lele16g1966 238 PANTHER LEUCINE RICH REPEAT KINASE 2 2 115 - -
Lele16g1966 238 Gene3D Transferase(Phosphotransferase) domain 1 116 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1966 Lele-ChrLele16 12004332 12006010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1966 123 205 Receptor kinase-like Gene Family AT5G56040 27.473 2.32e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele16g1966 PK_Tyr_Ser-Thr 2.3e-06 CL0016