Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1954 ATGTCAAACTTTTGCACATACGAGCTCGAAGATAATGTGTGGAATGAATTTGGCGAGAATGATGATCATATAGTGCCCCAGGCTGGTGATGAACATAAAGAACAGTTTGCAATACAGGGCAATAGCTGCAAGAAACCCTGCCAGGAGTTACATAATAACAAAAGTGATGATAATGTTAGTAGTCCCAATACTCATGATAAGGAGAAATTATACTTAATGTCTCAGAAGGAAAACATGTTGGAAAAGAATTCCTGGTCTCAGAAACCTGAAGGTGTGTTTCCTTCATGCAATGCTGACACAAGTGAAGAAGTGAAAAGACTAGCAACAGATGATAGAGGGATGTTTGGCCAATGTTACAAGAGCAGAAATATGGATTCTAGTGGTAGTGAATTTTGTGCTAATGATACTATTTTGGGAGACAAATGTATAGTGGAAGATGATAGTGTGTGTCAATATCCAATCAACCACATATCACAGACTGATAATGAACTCAGTTTTCTTGATAATGATGGGTGGCTTGATATTGGAAACTTTGAAGATGTTGACCGGATGTTTAGAACTTGTGATTCAACATTTGGAATGGGGAACCTTAATAATGAAGAGGAGTTCTGCTGGCTCCCATCTTCACACAGCACAGAAGGATCCGATGAAGCATTGAAGTCTGACTTCAAATTTTCATGTCCTGAAGCAGGTCCAATGAAAATTATATCAGATTATAATATAGATTCCAAACCAGATGTTGAAGGTCCAACAATAGCTGATTCCAACAAAAAAGCATCTTCTGTTGATAGAAGATTGAGATGTCTAATGTATGTTGATGATGATGCTGTCCCTGGTCCATTATCATTGTTAAACGAACTAGACATGAAATCTGGTAATACAGATGACTTGAGGTTCAAAGATAAGATGCAAAAGACGCTGTCCAAGGCATATGAAGGAGGAATAGAAGATGTATGCCTTGAAAATGGTGATTCTTTTCATCACTTTTCTCCTCCAATTCAATATGAAGATGGGAAGCAAGCCAATGAAGCCTCTTCCAGTGGGGTTAATTCTCATGCTAGCATCCTGAAACAGAAACAAAACCTAAATTCAGGCGTACAAACTGAAGTTTCTCTGACAGTCCCAGACTATAGTAATGGACTGAATCACACTTCTCTCCTTCCAACTTCACCAGGATCCAGATCTGATCTTGAAGGCAATCCATCTCCTCTAAAAGAATCATCCTATGCATCAAACATGGCTGGTACTCGTGGTCATTCCATGCAAGATGCTTCTTTGAAAAAAAATGAAAGGGGAGAAAAGTTATACCACAGTCATGATGCCCGTGCACTATCTAAGAGTTCAAAAAATGAAAATATAGCAAGTGTAGCACCATTTAGCAGTCCAGGTTCAGCTCAACAGCAATTGTCTCAGTTTGAAAATGAGAATGAAGGTCATAGTGTAGTGGGAGGAGTTAGCATAGAAATAGACTCCTCGAATGTGCAGGAAAGCTTAACCATGAGCTCTGCATTGGAGGAGCTCTCCCTTGAAGCTACCAACTTTCGTCAGCTGCAGCAGGTTATGGATCAGTTGGATATTAGAACCAAAATGTGCTTAAGAGACAGTTTATATCGCTTGGCTAAGAGTGCTGAACAAAGGCATGCTTATGCAAACATAAATGTTAGCGATGGAGATGATGTCGAAGCTGGCAAAGCTATGGTGCAGGATTCAAGCAGGTGTACTGGACTCAGAGACATGGAAACTGACACTAATCCTATTGATCGGTCTATAGCACACTTACTTTTTCACAGGCCCTCTGACTCATCTAGGTTGCCTCTTGACGATGCCTTCCCTTTGAAATCTAATGTTATGATGCATGGATCAGTGACCAATCCACCAGTGGGGATTGAGAATCAGGAGGAAGCTACTAATGGCGTGGATCAAAAACACTTCGGAGGTTAA 1941 0.4024 MSNFCTYELEDNVWNEFGENDDHIVPQAGDEHKEQFAIQGNSCKKPCQELHNNKSDDNVSSPNTHDKEKLYLMSQKENMLEKNSWSQKPEGVFPSCNADTSEEVKRLATDDRGMFGQCYKSRNMDSSGSEFCANDTILGDKCIVEDDSVCQYPINHISQTDNELSFLDNDGWLDIGNFEDVDRMFRTCDSTFGMGNLNNEEEFCWLPSSHSTEGSDEALKSDFKFSCPEAGPMKIISDYNIDSKPDVEGPTIADSNKKASSVDRRLRCLMYVDDDAVPGPLSLLNELDMKSGNTDDLRFKDKMQKTLSKAYEGGIEDVCLENGDSFHHFSPPIQYEDGKQANEASSSGVNSHASILKQKQNLNSGVQTEVSLTVPDYSNGLNHTSLLPTSPGSRSDLEGNPSPLKESSYASNMAGTRGHSMQDASLKKNERGEKLYHSHDARALSKSSKNENIASVAPFSSPGSAQQQLSQFENENEGHSVVGGVSIEIDSSNVQESLTMSSALEELSLEATNFRQLQQVMDQLDIRTKMCLRDSLYRLAKSAEQRHAYANINVSDGDDVEAGKAMVQDSSRCTGLRDMETDTNPIDRSIAHLLFHRPSDSSRLPLDDAFPLKSNVMMHGSVTNPPVGIENQEEATNGVDQKHFGG 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1954 646 MobiDBLite consensus disorder prediction 625 646 - -
Lele16g1954 646 MobiDBLite consensus disorder prediction 375 419 - -
Lele16g1954 646 MobiDBLite consensus disorder prediction 454 474 - -
Lele16g1954 646 MobiDBLite consensus disorder prediction 339 353 - -
Lele16g1954 646 MobiDBLite consensus disorder prediction 375 427 - -
Lele16g1954 646 PANTHER PROTEIN LNK1 8 627 IPR039928 GO:0006355|GO:0007623
Lele16g1954 646 MobiDBLite consensus disorder prediction 330 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1954 Lele-ChrLele16 11904595 11912661 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g1954 16 11904595 11912661 Lele13g0549 13 17728997 17729719 CCT
Lele16g1954 16 11904595 11912661 Lele14g0452 14 16170478 16173019 CCT
Lele16g1954 16 11904595 11912661 Lele15g1935 15 12079212 12081567 CCT
Lele16g1954 16 11904595 11912661 Lele16g1964 16 11976261 11979432 CCT
Lele13g0559 13 17800043 17807197 Lele16g1954 16 11904595 11912661 hybridization
Lele14g0462 14 16228851 16239601 Lele16g1954 16 11904595 11912661 hybridization