LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele16g1948	ATGGCGGAGGAGGGACGATTGGAGAGTGGTGAGAACATTGGCGGGTTTTCCATGGATTCCATTGAATCCAGGTGGGTTTTTCAGGAGGAGGATGAGTGGGAAGGTGAGTACGATGAAGATGAAAACGAGGATGGCGATCATTCGAGGAAATATAATATGTTGGATTCCGAGGACGAGGACGACGGTGAGCCGAGGCTGGTTAGGACTGGCGCTCGAATCGATCCCTTCGATGCTGAAGCTCTTGAGGTCTCTGGTACTCAGAGGGATGACAGTGAGAATTTGGATTTGGGAAGGAGTATTTTTGTGGCTATTCAGACCCTTGGTGTTATCTTTGGGGATGTTGGAACGAGTCCATTATATACCTTCAGTGTCATGTTTAGAAAGGCCCCAATTGATGGAAATGAAGACATTCTTGGAGCATTATCACTTGTCCTGTACACCTTAATCTTATTTCCTCTATTGAAGTATGTCATGGTTGTTCTATGGGCTAATGATGGCGGTGAAGGTGGTACTTTTGCCTTGTACTCCTTGATTTCTCGTCATGCTAAGGTTAGTCTTCTTCCGGATCAGTTGCCATCAGATGCTCGCATATCATCAGACACTCCCATATCGAAATTTAGGCTAAAGGTGCCAACCCCTGAGCTTGAAAGGTCAATAAAAATCAAGGAAAGACTCGAGACTTCGCTGACTCTGAAGAAGCTTTTACTAATATTAGTACTGGCTGGTACATCTATGGTAATAGCTAATGGAATTGTTACGCCAGCAATATCAGTAATTTCTTCTGTTGGTGGTTTAAAGGTGAGGATAGACGCAATCAAGCAAGATGAAGTGGTGATGATTTCAGTTGTCTGCCTTGTCATTTTGTTCAGTGTACAGAAGTATGGAACAAGTAAAATGGGACTTTTTGTCGGACCAGCTTTGTTAATATGGTTTTGTTCTCTTGCTGGTGTTGGGATCTACAATCTTTTCAAATATGACAGCAGCGTCTTGAGGGCATTTAGTCCTATTCACATCTATCACTTCTTTGAGAGGAATTCAACTAAAGCATGGTATTCTCTAGGGGGCTGTCTTATGTGCGCATCAGGTTCTGAGGCCATGTTTGCAGATCTTTGCTACTTCTCTGTACAATCAGTTCAGCTTACATTTTTCTTTCTTGTTCTGCCATGCCTACTATTGGGTTATTTGGGTCAAGCTGCGTACCTGATGGAAAACCATGCTGATGCTGGTGATGTTTTCTTCTCTTCTATCCCAAGTGGTGTGTTCTGGCCAATTTTCCTCATTGCTAACATTGCTGCAATGATTGCAAGTCGAGCTATGACAACTGCCACTTTTTCTTGCATAAAACAATCTATTGCACTTGGGTGTTCCCCTCGCCTTAAAGTAATTCATACCTCTCGGAAATTTATGGGTCAGATCTACATCCCTGTTATTAACTGGTTCCTTTTGGCTCTTTCACTGGTGCTTGTCTGTTCTATATCCAACATCGAAGAGATTGGAAATGCATATGGCATTGCAGAGCTCGGAGTGATGATGATGACCTCTGTTTTGGTTACCCTCATTATGCTTCTTATATGGCAGACGCACATAATCAAAGTGCTCATTTCTATGACGGGCTTCTTGGGATTGGAGTTGACTTTCTTTTCATCAATTTTGTTGAGCATTGCAGATGGAAGTTGGATAATATTGGTTTTTGCCATAGCAATGTTTCTTATCATGTATATATGGACTTATGGTAGCAAGCTCAAGTATGAAACTGAAGTCAAGCAAAAGTTATCAATGGATTTGATGCGGCAATTAGGTTGTACTCTGGGAACAGTACGAGCACCTGGCATCGGTTTGATTTATAATGAGTTGGCCAAAGGAATTCCATCAATTTTCGGCCATTTTCTGACCTCACTTCCAGCAATACATTCCTTGATTATATTTGTGTGTGTCAAGAATGTTCCAGTTCCAGTGGTACCCCAAAGTGAAAGGTTCCTTTTCCGGCGAGTCTGCCCAAGAAGCTACCATATCTTCCGTTGTATTGCCAGGTATGGTTACAAAGATGTGCTGAAAGAAAATCAACAGGTTTTTGAGCAGATTCTGATTGAGAGCCTAGAGAAGTTTGTTCGTAAAGAGTCTCAGGAGCGATCATTGGAGAGTGACAGGGACGATAGCGATTCAGAGGATGATAGCAATTCTAGGGTTCTCGTTGCTCCCAATGGGAGTGTTTACTCTCTTAGTGTTCCTCTCCTGGCTAACTACAATAATAATAGAAGCAACCCCATTTCCATGGCTAGCACATCAGAGGTTAGCCCATCATCTTCTAATCTTCCTGCTTTTGATGCAGAGCAGAGTCTTGAAAGGGAGCTAACCCTTATGCGTATGGCTAAAGAATCTGGAGTTGTTTATCTTCTTGGTCATGGGGATATAAGGGCAAGGAAGGATTCATGGTTTATCAAAAAGCTAGTTATAAACTATTTTTATGCCTTTTTGAGAAAGAATTGCAGGAGGGCGACTGCAAATTTAACCGTGCCCCACACACGTCTGATACAGGTCGGCATGACTTACATGGTTTGA	2559	0.4248	MAEEGRLESGENIGGFSMDSIESRWVFQEEDEWEGEYDEDENEDGDHSRKYNMLDSEDEDDGEPRLVRTGARIDPFDAEALEVSGTQRDDSENLDLGRSIFVAIQTLGVIFGDVGTSPLYTFSVMFRKAPIDGNEDILGALSLVLYTLILFPLLKYVMVVLWANDGGEGGTFALYSLISRHAKVSLLPDQLPSDARISSDTPISKFRLKVPTPELERSIKIKERLETSLTLKKLLLILVLAGTSMVIANGIVTPAISVISSVGGLKVRIDAIKQDEVVMISVVCLVILFSVQKYGTSKMGLFVGPALLIWFCSLAGVGIYNLFKYDSSVLRAFSPIHIYHFFERNSTKAWYSLGGCLMCASGSEAMFADLCYFSVQSVQLTFFFLVLPCLLLGYLGQAAYLMENHADAGDVFFSSIPSGVFWPIFLIANIAAMIASRAMTTATFSCIKQSIALGCSPRLKVIHTSRKFMGQIYIPVINWFLLALSLVLVCSISNIEEIGNAYGIAELGVMMMTSVLVTLIMLLIWQTHIIKVLISMTGFLGLELTFFSSILLSIADGSWIILVFAIAMFLIMYIWTYGSKLKYETEVKQKLSMDLMRQLGCTLGTVRAPGIGLIYNELAKGIPSIFGHFLTSLPAIHSLIIFVCVKNVPVPVVPQSERFLFRRVCPRSYHIFRCIARYGYKDVLKENQQVFEQILIESLEKFVRKESQERSLESDRDDSDSEDDSNSRVLVAPNGSVYSLSVPLLANYNNNRSNPISMASTSEVSPSSSNLPAFDAEQSLERELTLMRMAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNCRRATANLTVPHTRLIQVGMTYMV	852

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele16g1948	852	MobiDBLite	consensus disorder prediction	1	65	-	-
	Lele16g1948	852	MobiDBLite	consensus disorder prediction	43	65	-	-
	Lele16g1948	852	MobiDBLite	consensus disorder prediction	707	725	-	-
	Lele16g1948	852	Pfam	K+ potassium transporter	104	682	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele16g1948	852	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	98	850	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele16g1948	852	TIGRFAM	kup: potassium uptake protein	103	852	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele16g1948	852	MobiDBLite	consensus disorder prediction	707	728	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele16g1948	Lele-ChrLele16	11858975	11865401	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele16g1948	1	852	Inorganic Solute Cotransporters	AT5G09400	70.230	0.0	1198