Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1943 ATGGATAATCTTTGTTGCTTCAACTCTGTCTCTAAGGTTCTTGGAGGGCGTTCTTCATGTAGCTCTGGCAAGGGCAGAGGCCATCAGTGCCCAGTCAAGTATGGCTTTTGCCTTGTAAAAGGGAAAGCAAGCCACCCCATGGAGGACTATCATGTAGCAAAATTTGTCCAGCTCAGAGGACATGAGATTGGGCTGTTTGCTATATATGATGGGCACTTAGGAGACAGTGTACCAGCCTATCTACAAAAGCATCTCTTTTCTAATATATTAAAAGATGAGGACTTCTTGACTGATCCGAACAGGTCAATTATCAAAGCCTATGAGACAACAGATCAGGCAATTCTATCTCACAGTGCTGATTTGGGGCGAGGTGGATCAACTGCAGTGACTGCAATTCTTTTAAATAATCAGAAATTATGGATAGCTAATGTTGGAGATTCACGAGCAGTTATGTCCATGGGAGGTTCGTCCATACAGATGAGTACTGATCATGAGCCTAACACTGAGCGGGACTGTATTGAGGACAGCGGTGGCTTTGTCTCAAACTTGCCAGGGGATGTCGCAAGAGTGAATGGCCAACTTGCAGTTTCTCGAGCATTTGGGGACAAAAACCTAAAATCACACTTGCGATCCGATCCTGACATACAGCATGTTGATATTTATCCAGACACTGAGCTTTTGATTATCGCAAGTGATGGCCTATGGAAGGTTATGGCAAATCAAGAGGCAGTTGATATTGCAAGAAAGATTAAGGATCCACAAAAGGCAGCCAAACAACTAGTCGTGGAGGCATTGAACAGGGAGAGCAAAGACGATATTTCCTGCATTGTTGTTCGTTTCAAGGGATGA 849 0.4405 MDNLCCFNSVSKVLGGRSSCSSGKGRGHQCPVKYGFCLVKGKASHPMEDYHVAKFVQLRGHEIGLFAIYDGHLGDSVPAYLQKHLFSNILKDEDFLTDPNRSIIKAYETTDQAILSHSADLGRGGSTAVTAILLNNQKLWIANVGDSRAVMSMGGSSIQMSTDHEPNTERDCIEDSGGFVSNLPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDIQHVDIYPDTELLIIASDGLWKVMANQEAVDIARKIKDPQKAAKQLVVEALNRESKDDISCIVVRFKG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1943 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Lele16g1943 282 FunFam Probable protein phosphatase 2C 39 24 281 - -
Lele16g1943 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Lele16g1943 282 PANTHER PROTEIN PHOSPHATASE 28 280 - -
Lele16g1943 282 SUPERFAMILY PP2C-like 28 281 IPR036457 -
Lele16g1943 282 Gene3D - 29 282 IPR036457 -
Lele16g1943 282 SMART PP2C_4 25 278 IPR001932 -
Lele16g1943 282 CDD PP2Cc 32 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1943 Lele-ChrLele16 11790861 11795838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1943 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.383 4.04e-147 412