Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1940 ATGCCAACAGTTTTGGCAAACAACACACAGATGGAAGAAGGGGCTTGTGCTTCCTCAGTTGAAGCTGAATCTCAAGAAGCAGGAAGACATAAGAAGATTAGAACATCATGTGTATGGTGTGGTATAGTCTTTGATTATGATGCTGTTGATTCTGAAGTTCAACCAGATTCTGTTGGATTCATGTGCGCGGCTTGTAAGGCCAAAATTTCTGGTCAAATCGATGTTGATACAACGTTGTATACAGAACATATCTATCTGGCAGAAATACGTGTGAATATTTTTATCATTTGTTCATTTCATCATGTGCATGTTAGTCTCTATATATACATACATCTTCTTGCAGCCTCCATGTCAAGCCATAAGGAGAAAACTAAGCAACAAACACTTGGAGCTATGCTGAAATACAAGAAGTACAGAAAGCCAAATAATGGGGAGGCACAAATCACCTGCAGGAAGTGCAGGGGAGAGTTTTATGTGCCCTCATCCACAACTACATACCGTTGCCCTCTTTGCAAAACTATCAATAATGGGCCATCAAATAAAGATAGTGGCAATGGAATGGCGCTGCTGAAATTTGCTGCTGCTAAGAATATCGTCAAATCTGATCATATGTTACAGAATGGTAGCAAAAGTGATTATGTTCTGAATCAAAGGCCTTCTTCATTCTCATCCCGAAGAAGCAATAAGCGTGCGGTTCTCTGTGGAGTTACTTACAGGAAAAGGAGGTACAGACTCAAAGGAACCATTAATGATATTGCTAACATGAGGGAGCTTCTGGTTAAGGTTTTTGACTTTCCTATTGAATGCATACATGAGCTCACAGAAGAGAAAAAGAGTCCAGATTTAGTTCCAACGAAGAAAAACATACTGCAACAATTGAATTGGCTTGTGGAAGGCTGCCAATCAGGAGACTCACTGGTGTTTTACTTCTCAGGACATGGCATTCAACACACAGATTCCAAAGAAGATGAGATAGATGGGATGGACGAAAGCATTTGTCCGGTCGATTTCTTGGAAGAAGGCACGATTCTCGATGACGATATAAACTCCATGCTTGTTTGGTCGCTAAAAGATGGTGTAACACTTCATGTCATTGTTGATGCTTGTCATAGTGGAACAATTCTTGATCTATCATATGTCTATGACCCTCTAAAATGCACATGGAAAGATAACAGGCCTCCTTCCAAAGAACCTTCTAGAAAGGATCCGAACGGTGGGCGGGCAATTTGCATTAGTGCTTGTAAAGATCATCAGATGGCTGCTGATACCTCAGCTTTCCGTGGGAAGGGGATGAATGGTGTAATGACCTATCTTTTCACAAAAGTCATCAGACAACATCCTGATATAACATACAAGGGTTTACTGGAACAGATTGGGAAGGAAATTGAAGAGATTATCAGAAATGGTTGTCGTCCATCTTTTTTGCATCGTCGCAAAATTGTGCAGGATCTTGTTATTTCATCATCTCAAGAGTTCGATGTTTCTAGGGCTATATTCACATTATGA 1506 0.4044 MPTVLANNTQMEEGACASSVEAESQEAGRHKKIRTSCVWCGIVFDYDAVDSEVQPDSVGFMCAACKAKISGQIDVDTTLYTEHIYLAEIRVNIFIICSFHHVHVSLYIYIHLLAASMSSHKEKTKQQTLGAMLKYKKYRKPNNGEAQITCRKCRGEFYVPSSTTTYRCPLCKTINNGPSNKDSGNGMALLKFAAAKNIVKSDHMLQNGSKSDYVLNQRPSSFSSRRSNKRAVLCGVTYRKRRYRLKGTINDIANMRELLVKVFDFPIECIHELTEEKKSPDLVPTKKNILQQLNWLVEGCQSGDSLVFYFSGHGIQHTDSKEDEIDGMDESICPVDFLEEGTILDDDINSMLVWSLKDGVTLHVIVDACHSGTILDLSYVYDPLKCTWKDNRPPSKEPSRKDPNGGRAICISACKDHQMAADTSAFRGKGMNGVMTYLFTKVIRQHPDITYKGLLEQIGKEIEEIIRNGCRPSFLHRRKIVQDLVISSSQEFDVSRAIFTL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1940 501 PANTHER METACASPASE-4 225 494 - -
Lele16g1940 501 SUPERFAMILY Caspase-like 232 463 IPR029030 -
Lele16g1940 501 Pfam Caspase domain 229 463 - -
Lele16g1940 501 Gene3D - 181 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1940 Lele-ChrLele16 11772540 11777349 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0583 13 18053617 18058717 Lele16g1940 16 11772540 11777349 CCT
Lele13g0572 13 17899724 17901788 Lele16g1940 16 11772540 11777349 hybridization
Lele14g0475 14 16369780 16378502 Lele16g1940 16 11772540 11777349 hybridization