Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1929 ATGAGTTGCTTTCTGCAGAAAACTGATAATCATCATCATGGCTCGTCGAGACGAGTAGGGCAAATAGTGAGCTTAGAAATGGAGGAAGATAGAACAGATATGGGAGCAGCAACAGCAGAAGAAGAAGGTATATGTCTGACGTGGCAGGATCTGAAGGTGACAGTGTCAAATGGGAAAGAGAAGTCGAAGGCAATCCTGGAAGGTCTCGCTGGTTATGCCAAGCCAGGTCAGCTCTTAGCCATTATGGGTCCTTCTGGTTGTGGCAAGTCCACCCTTCTTGATGCCTTAGCAGGTAGGTTGCGTACAAAGGCAAAGCAGACAGGAGAAATCCTTATCAATGGCCGCAAACAAACACTAGCTTATGGAACATCAGCATATCTGACACAAGAGGATGCAATATTGACGACGTTAACAGTGCGAGAAGCGGTGCACTACTCAGCTCAGCTGCAACTTCCCGATTCGATGAGCGAGTCAGAGAAGAAGGAGAGAGCAGACTTCACAATAAGAGAAATGGGTTTACAAGACGCCATTAACACAAGGATTGGAGGGTGTAACAATGGAGGTTCTAAAGGAATAAGTGGAGGACAAAAGAGGAGAGTTAGCATTTGCATTGAGATTCTCACAAGGCCAAGCCTTTTGTTCCTTGATGAACCAACCAGTGGGCTTGATAGTGCAGCTTCTTACTATGTTATGAGCAGAATTGCAAGCTTGAATCAGAAGGATGGGATTCAGAGGACTATTATTGCAGCAATTCATCAGCCTAGTAGTGAGGTTTTTGAGCTTTTTCATAACCTTTGTCTTCTGTCTTCTGGTCAAGCTGTCTACTTTGGCCCTGCTTCTGCTGCAAATGAGTTTTTTGCATCAAATGGTTTTCCCTGCCCTACTCTAAACAGTCCCCCCGATCATTTTGTAAAGACCATCAACAATGATTTTGAGAAGGAGGACCCTGAGCAAGGATTATCAGAAGGACTAACCAAAGAAGAAGCAGTTCATATTCTTGTGAAATCATACAAGTCATCTGCAATCTGTCACCAAGTTCAAACTGAAGTAGTTAAAATAAGAACAAGGAATTGTGGTACAAGGGAGATGACAAGCCATGCTTCATTCTTGAAGCAGTGCATCATTCTTACAAGAAGATCATTTCTGAATATGCATCGCGATCTAGGCTACTACTGGTTACGTCTATTAATCTATGCTGGATTAGCTATAACTCTGGGCACTATCTTCTACAATGTTGGCTCAAGAGATTCAGCTCAGGTAAGAGGTTCACTGCTCATGTTTGTGGCCACATTCCTGAGTTTCATAACCATTGGTGGGTTTGCTTCCCTTGTGGAGGACATGAAGGTGTTTCAAAAAGAGAGACTAAATGGGCATTACGGTGTTGCTGCATACACCATTGGACACACATTATCTTGTACTCCATTCATTCTATTGATGTCACTGATTCCGGGAGCGATAGTTTATTACCTAACCGGACTTCATCGAGGCGGTCAACATTTCCTCTACTTCGCTTCTGTGCTTTTCATCTCAGTAATGTTGGTTGAGAGCTTCATGATGATTGTTGCAAGCATGCTTCCGAATTTCTTGATGGGGATGATCACCGGTGCTGGAGTTCTCGGCGTAATGATGTTAACCGGCGGATTCTATCGCCTACCCGAAGAACTTCCGAAATTCTTATGGAAATATCCTTGTTACTACATTTCCATTCACAGGTATGCATACCATGGATTGTTCAAGAATGAGTTTGAAGGTCAGACATTTAGTATCATTCAAGAGAAGAGGCCAAGGATCATTAGTGGGGAAGAAATGATGAGAAATTCATGGCAGATCGATGTCGAAAACTCAAAGTGGATCGATCTTTTGATCCTGGTAGGAATGGCAGTTCTGTATAGAAGTCTGTTCATGATCACTGTCAAGAGCATTGAGAAGTTGAAGCCTATAGTTGCGTCTTTCAAATTCAAGTGA 1965 0.4305 MSCFLQKTDNHHHGSSRRVGQIVSLEMEEDRTDMGAATAEEEGICLTWQDLKVTVSNGKEKSKAILEGLAGYAKPGQLLAIMGPSGCGKSTLLDALAGRLRTKAKQTGEILINGRKQTLAYGTSAYLTQEDAILTTLTVREAVHYSAQLQLPDSMSESEKKERADFTIREMGLQDAINTRIGGCNNGGSKGISGGQKRRVSICIEILTRPSLLFLDEPTSGLDSAASYYVMSRIASLNQKDGIQRTIIAAIHQPSSEVFELFHNLCLLSSGQAVYFGPASAANEFFASNGFPCPTLNSPPDHFVKTINNDFEKEDPEQGLSEGLTKEEAVHILVKSYKSSAICHQVQTEVVKIRTRNCGTREMTSHASFLKQCIILTRRSFLNMHRDLGYYWLRLLIYAGLAITLGTIFYNVGSRDSAQVRGSLLMFVATFLSFITIGGFASLVEDMKVFQKERLNGHYGVAAYTIGHTLSCTPFILLMSLIPGAIVYYLTGLHRGGQHFLYFASVLFISVMLVESFMMIVASMLPNFLMGMITGAGVLGVMMLTGGFYRLPEELPKFLWKYPCYYISIHRYAYHGLFKNEFEGQTFSIIQEKRPRIISGEEMMRNSWQIDVENSKWIDLLILVGMAVLYRSLFMITVKSIEKLKPIVASFKFK 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1929 654 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 284 IPR027417 -
Lele16g1929 654 ProSitePatterns ABC transporters family signature. 192 206 IPR017871 GO:0005524|GO:0016887
Lele16g1929 654 Pfam ABC-2 type transporter 252 315 IPR043926 GO:0140359
Lele16g1929 654 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 46 295 IPR003439 GO:0005524
Lele16g1929 654 Pfam ABC transporter 72 220 IPR003439 GO:0005524
Lele16g1929 654 Pfam ABC-2 type transporter 372 582 IPR013525 GO:0016020|GO:0140359
Lele16g1929 654 SMART AAA_5 75 267 IPR003593 -
Lele16g1929 654 FunFam ABC transporter G family member 11 44 336 - -
Lele16g1929 654 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 33 650 - -
Lele16g1929 654 MobiDBLite consensus disorder prediction 1 20 - -
Lele16g1929 654 Gene3D - 46 312 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1929 Lele-ChrLele16 11657079 11663811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1929 65 250 Calmodulin-binding Proteins AT2G36910 27.461 1.62e-08 56.2