Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1917 ATGGGAGTAGAGAAGCAAATCCTCAGGCCTGGAACTGCTCCGAAGCCAGTAGCTGGCCAAAACGTCACCGTTCACTGCACTGGTTACGGAAAAAACGGTGACCTTTCTCAGAAATTTTGGAGCACCAAGGATCCTGGGCAGCAGCCTTTCACGTTTAAGATTGGCCAAGGTTCTGTTATAAAAGGATGGGATGAAGGTGTGATGGGTATGCAAATTGGTGAAGTTGCTCGTCTGCGGTGCTCTCCTGACTATGCTTATGGTCCTCAAGGATTTCCTGCTTGGGGAATTATGCCAAACTCTGTCTTGGACTTTGAAATTGAAGTCCTGAGAGCGCAGTGA 339 0.4838 MGVEKQILRPGTAPKPVAGQNVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFKIGQGSVIKGWDEGVMGMQIGEVARLRCSPDYAYGPQGFPAWGIMPNSVLDFEIEVLRAQ 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1917 112 Gene3D - 1 112 IPR046357 GO:0003755
Lele16g1917 112 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 2 111 - -
Lele16g1917 112 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 112 IPR001179 GO:0003755
Lele16g1917 112 FunFam Peptidylprolyl isomerase 1 112 - -
Lele16g1917 112 SUPERFAMILY FKBP-like 2 109 - -
Lele16g1917 112 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 15 109 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1917 Lele-ChrLele16 11558491 11560519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1917 16 109 Calmodulin-binding Proteins AT5G48570 44.681 3.07e-16 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0600 13 18198190 18200563 Lele16g1917 16 11558491 11560519 hybridization
Lele14g0497 14 16625241 16629594 Lele16g1917 16 11558491 11560519 hybridization